RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 CCDC178Q5BJE1 867 aa5.66□□□□□ -1.5
COL9A1-206ENST00000470652 ZNF585AQ6P3V2 769 aa5.66□□□□□ -1.5
COL9A1-206ENST00000470652 HDGFL2Q7Z4V5 671 aaPredicted RBP5.66□□□□□ -1.5
COL9A1-206ENST00000470652 POLNQ7Z5Q5 900 aa5.66□□□□□ -1.5
COL9A1-206ENST00000470652 CLEC14AQ86T13 490 aa5.66□□□□□ -1.5
COL9A1-206ENST00000470652 GPR135Q8IZ08 494 aa5.66□□□□□ -1.5
COL9A1-206ENST00000470652 FUKQ8N0W3 1084 aa5.66□□□□□ -1.5
COL9A1-206ENST00000470652 SHCBP1Q8NEM2 672 aa5.66□□□□□ -1.5
COL9A1-206ENST00000470652 WWC2-AS2Q96NR7 200 aa5.66□□□□□ -1.5
COL9A1-206ENST00000470652 OR14A2Q96R54 314 aa5.66□□□□□ -1.5
COL9A1-206ENST00000470652 ANO3Q9BYT9 981 aa5.66□□□□□ -1.5
COL9A1-206ENST00000470652 SCAND2PQ9GZW5 306 aaPredicted RBP5.66□□□□□ -1.5
COL9A1-206ENST00000470652 MS4A5Q9H3V2 200 aa5.66□□□□□ -1.5
COL9A1-206ENST00000470652 KIF14Q15058 1648 aa5.66□□□□□ -1.5
COL9A1-206ENST00000470652 A0A0A6YYK5 440 aaPredicted RBP5.65□□□□□ -1.5
COL9A1-206ENST00000470652 GOLGA8BA8MQT2 603 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 HNRNPLP14866 589 aaKnown RBP eCLIP5.65□□□□□ -1.5
COL9A1-206ENST00000470652 COMTP21964 271 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 XPAP23025 273 aaPredicted RBP5.65□□□□□ -1.5
COL9A1-206ENST00000470652 SELENOPP49908 381 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 MANFP55145 182 aaKnown RBP5.65□□□□□ -1.5
COL9A1-206ENST00000470652 BPIFB4P59827 614 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 FAPQ12884 760 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 TCIRG1Q13488 830 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 GRM7Q14831 915 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 ANKRD53Q8N9V6 530 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 PPP1R14CQ8TAE6 165 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 GAB3Q8WWW8 586 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 SOX7Q9BT81 388 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 C14orf93Q9H972 538 aaKnown RBP5.65□□□□□ -1.5
COL9A1-206ENST00000470652 PLA2G3Q9NZ20 509 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 USP18Q9UMW8 372 aa5.65□□□□□ -1.5
COL9A1-206ENST00000470652 HECW1Q76N89 1606 aa5.65□□□□□ -1.51
COL9A1-206ENST00000470652 CASKIN1Q8WXD9 1431 aa5.65□□□□□ -1.51
COL9A1-206ENST00000470652 UACAQ9BZF9 1416 aa5.65□□□□□ -1.51
COL9A1-206ENST00000470652 ATP10BO94823 1461 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 EPRSP07814 1512 aaKnown RBP5.64□□□□□ -1.51
COL9A1-206ENST00000470652 A0A1W2PRX2 142 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 NRP2O60462 931 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 EYA4O95677 639 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 JUNP05412 331 aaKnown RBP5.64□□□□□ -1.51
COL9A1-206ENST00000470652 VSIG10L2P0DP72 767 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 C6P13671 934 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 GDF5P43026 501 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 RIN1Q13671 783 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 IQSEC1Q6DN90 963 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 CLRN3Q8NCR9 226 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 EDAQ92838 391 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 FAM89AQ96GI7 184 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 RPL10LQ96L21 214 aaKnown RBP5.64□□□□□ -1.51
COL9A1-206ENST00000470652 UIMC1Q96RL1 719 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 SPC25Q9HBM1 224 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 TOPORSQ9NS56 1045 aaPredicted RBP5.64□□□□□ -1.51
COL9A1-206ENST00000470652 PRSS50Q9UI38 385 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 TMPRSS11EQ9UL52 423 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 TSC22D4Q9Y3Q8 395 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 TESMINQ9Y4I5 508 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 PPP2R3BQ9Y5P8 575 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 FYCO1Q9BQS8 1478 aa5.64□□□□□ -1.51
COL9A1-206ENST00000470652 TIAM1Q13009 1591 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 TSPOAP1O95153 1857 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 TOX4O94842 621 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 KIR2DL3P43628 341 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 NRG3P56975 720 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 STAT4Q14765 748 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 PDCD1Q15116 288 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 PRKD1Q15139 912 aaPredicted RBP5.63□□□□□ -1.51
COL9A1-206ENST00000470652 RNF187Q5TA31 235 aaPredicted RBP5.63□□□□□ -1.51
COL9A1-206ENST00000470652 KRT40Q6A162 431 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 SPRED1Q7Z699 444 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 ADGRE4PQ86SQ3 457 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 UNC5BQ8IZJ1 945 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 OR14C36Q8NHC7 312 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 WDR66Q8TBY9 1149 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 ACAP3Q96P50 834 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 MRIQ9BWK5 157 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 AGO3Q9H9G7 860 aaKnown RBP5.63□□□□□ -1.51
COL9A1-206ENST00000470652 FMN1Q68DA7 1419 aa5.63□□□□□ -1.51
COL9A1-206ENST00000470652 KIF13AQ9H1H9 1805 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 MUSKO15146 869 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 MTSS1O43312 755 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 DNAJC6O75061 913 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 SEC24DO94855 1032 aaPredicted RBP5.62□□□□□ -1.51
COL9A1-206ENST00000470652 CLEC2LP0C7M8 214 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 GAAP10253 952 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 MSX2P35548 267 aaPredicted RBP5.62□□□□□ -1.51
COL9A1-206ENST00000470652 HHEXQ03014 270 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 CD69Q07108 199 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 FOXL1Q12952 345 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 SAFB2Q14151 953 aaKnown RBP eCLIP5.62□□□□□ -1.51
COL9A1-206ENST00000470652 ACAP1Q15027 740 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 FSCN1Q16658 493 aaKnown RBP5.62□□□□□ -1.51
COL9A1-206ENST00000470652 RNF219Q5W0B1 726 aaPredicted RBP5.62□□□□□ -1.51
COL9A1-206ENST00000470652 CCDC62Q6P9F0 684 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 LYSMD2Q8IV50 215 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 SH3RF3Q8TEJ3 882 aaPredicted RBP5.62□□□□□ -1.51
COL9A1-206ENST00000470652 ADOQ96SZ5 270 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 GPHA2Q96T91 129 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 MPHOSPH9Q99550 1183 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms