RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ZNF180Q9UJW8 692 aa6.76□□□□□ -1.33
LSM5-209ENST00000468872 LUC7L2Q9Y383 392 aaKnown RBP6.76□□□□□ -1.33
LSM5-209ENST00000468872 PRSS38A1L453 326 aa6.75□□□□□ -1.33
LSM5-209ENST00000468872 PRPF6O94906 941 aaKnown RBP6.75□□□□□ -1.33
LSM5-209ENST00000468872 ZSCAN20P17040 1043 aaPredicted RBP6.75□□□□□ -1.33
LSM5-209ENST00000468872 ACO1P21399 889 aaKnown RBP6.75□□□□□ -1.33
LSM5-209ENST00000468872 CCND1P24385 295 aa6.75□□□□□ -1.33
LSM5-209ENST00000468872 ACVRL1P37023 503 aa6.75□□□□□ -1.33
LSM5-209ENST00000468872 RPS19P39019 145 aaKnown RBP6.75□□□□□ -1.33
LSM5-209ENST00000468872 SLC6A3Q01959 620 aa6.75□□□□□ -1.33
LSM5-209ENST00000468872 PNMA8AQ86V59 439 aaPredicted RBP6.75□□□□□ -1.33
LSM5-209ENST00000468872 WDR75Q8IWA0 830 aaKnown RBP6.75□□□□□ -1.33
LSM5-209ENST00000468872 BCL6BQ8N143 479 aaPredicted RBP6.75□□□□□ -1.33
LSM5-209ENST00000468872 OR14K1Q8NGZ2 314 aa6.75□□□□□ -1.33
LSM5-209ENST00000468872 E2F7Q96AV8 911 aa6.75□□□□□ -1.33
LSM5-209ENST00000468872 EAF2Q96CJ1 260 aaPredicted RBP6.75□□□□□ -1.33
LSM5-209ENST00000468872 IP6K2Q9UHH9 426 aa6.75□□□□□ -1.33
LSM5-209ENST00000468872 FAM184BQ9ULE4 1060 aa6.75□□□□□ -1.33
LSM5-209ENST00000468872 FZD7O75084 574 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 SNUPNO95149 360 aaKnown RBP6.74□□□□□ -1.33
LSM5-209ENST00000468872 APOL3O95236 402 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 RGS3P49796 1198 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 SRSF2Q01130 221 aaKnown RBP6.74□□□□□ -1.33
LSM5-209ENST00000468872 HGFACQ04756 655 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 MAP3K12Q12852 859 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 PITRM1Q5JRX3 1037 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 TMEM240Q5SV17 173 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 PRAMEF9Q5VWM5 478 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 SLFN12LQ6IEE8 588 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 TIGD7Q6NT04 549 aaPredicted RBP6.74□□□□□ -1.33
LSM5-209ENST00000468872 RNF207Q6ZRF8 634 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 KANSL1Q7Z3B3 1105 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 AMOTL1Q8IY63 956 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 JPH3Q8WXH2 748 aaPredicted RBP6.74□□□□□ -1.33
LSM5-209ENST00000468872 SORCS2Q96PQ0 1159 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 QRSL1Q9H0R6 528 aaKnown RBP6.74□□□□□ -1.33
LSM5-209ENST00000468872 PRDM12Q9H4Q4 367 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 TCF7L1Q9HCS4 588 aa6.74□□□□□ -1.33
LSM5-209ENST00000468872 XPOTO43592 962 aaKnown RBP6.73□□□□□ -1.33
LSM5-209ENST00000468872 RFPL1O75677 317 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 RECQLP46063 649 aaPredicted RBP6.73□□□□□ -1.33
LSM5-209ENST00000468872 ROM1Q03395 351 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 FOXL1Q12952 345 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 CLUL1Q15846 466 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.73□□□□□ -1.33
LSM5-209ENST00000468872 USP39Q53GS9 565 aaKnown RBP6.73□□□□□ -1.33
LSM5-209ENST00000468872 TOR2AQ5JU69 321 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 KIAA1841Q6NSI8 718 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 CCDC62Q6P9F0 684 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 MAMDC4Q6UXC1 1216 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 UNQ6494/PRO21346Q6UXR6 183 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 GPR135Q8IZ08 494 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 CPA6Q8N4T0 437 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 FERMT2Q96AC1 680 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 FAM89AQ96GI7 184 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 C8orf48Q96LL4 319 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 DNAJC28Q9NX36 388 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 PLA2G3Q9NZ20 509 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 KCNG1Q9UIX4 513 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 TMPRSS11EQ9UL52 423 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 NOB1Q9ULX3 412 aaKnown RBP6.73□□□□□ -1.33
LSM5-209ENST00000468872 EDARQ9UNE0 448 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 MRFAP1Q9Y605 127 aa6.73□□□□□ -1.33
LSM5-209ENST00000468872 KLHL33A6NCF5 533 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 CYR61O00622 381 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 PRPF3O43395 683 aaKnown RBP6.72□□□□□ -1.33
LSM5-209ENST00000468872 SLC26A4O43511 780 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 LPLP06858 475 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 MSX2P35548 267 aaPredicted RBP6.72□□□□□ -1.33
LSM5-209ENST00000468872 MTNR1BP49286 362 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 ADCY2Q08462 1091 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 FOXE3Q13461 319 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 UGT8Q16880 541 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 NRN1LQ496H8 165 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 FAM102BQ5T8I3 360 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 KCNK18Q7Z418 384 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 LYSMD2Q8IV50 215 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 ZFPM1Q8IX07 1006 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 CMTR2Q8IYT2 770 aaKnown RBP6.72□□□□□ -1.33
LSM5-209ENST00000468872 MYO1HQ8N1T3 1032 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 JADE3Q92613 823 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 EXTL1Q92935 676 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 NELFAQ9H3P2 528 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 ZNF277Q9NRM2 450 aaPredicted RBP6.72□□□□□ -1.33
LSM5-209ENST00000468872 VWA7Q9Y334 891 aa6.72□□□□□ -1.33
LSM5-209ENST00000468872 SLPIP03973 132 aa6.71□□□□□ -1.34
LSM5-209ENST00000468872 ADAM15Q13444 863 aa6.71□□□□□ -1.34
LSM5-209ENST00000468872 TRIM25Q14258 630 aaKnown RBP6.71□□□□□ -1.34
LSM5-209ENST00000468872 ACAP2Q15057 778 aa6.71□□□□□ -1.34
LSM5-209ENST00000468872 USP51Q70EK9 711 aa6.71□□□□□ -1.34
LSM5-209ENST00000468872 C14orf80Q86SX3 495 aa6.71□□□□□ -1.34
LSM5-209ENST00000468872 TPH2Q8IWU9 490 aa6.71□□□□□ -1.34
LSM5-209ENST00000468872 TCEAL8Q8IYN2 117 aa6.71□□□□□ -1.34
LSM5-209ENST00000468872 ZNF808Q8N4W9 903 aaPredicted RBP6.71□□□□□ -1.34
LSM5-209ENST00000468872 ZNF503Q96F45 646 aa6.71□□□□□ -1.34
LSM5-209ENST00000468872 TEKT5Q96M29 485 aa6.71□□□□□ -1.34
LSM5-209ENST00000468872 ZNF341Q9BYN7 854 aa6.71□□□□□ -1.34
LSM5-209ENST00000468872 WNT8AQ9H1J5 351 aa6.71□□□□□ -1.34
LSM5-209ENST00000468872 CTDP1Q9Y5B0 961 aaPredicted RBP6.71□□□□□ -1.34
LSM5-209ENST00000468872 GPR45Q9Y5Y3 372 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms