RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 LRRC37A2A6NM11 1700 aa11.09□□□□□ -0.63
MSH5-213ENST00000468136 WDR81Q562E7 1941 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 ANO9A1A5B4 782 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 BTNL10A8MVZ5 291 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 HNRNPDLO14979 420 aaKnown RBP11.08□□□□□ -0.64
MSH5-213ENST00000468136 HOXD8P13378 290 aaPredicted RBP11.08□□□□□ -0.64
MSH5-213ENST00000468136 GLRA2P23416 452 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 TMOD1P28289 359 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 JAM2P57087 298 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 FSTL1Q12841 308 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 GRM1Q13255 1194 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 RAPGEF1Q13905 1077 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 SNRNP35Q16560 246 aaKnown RBP11.08□□□□□ -0.64
MSH5-213ENST00000468136 SLC18A3Q16572 532 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 KYAT1Q16773 422 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 ASTE1Q2TB18 679 aaPredicted RBP11.08□□□□□ -0.64
MSH5-213ENST00000468136 TDRD12Q587J7 1177 aaKnown RBP11.08□□□□□ -0.64
MSH5-213ENST00000468136 CCDC122Q5T0U0 273 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 CDCA2Q69YH5 1023 aaPredicted RBP11.08□□□□□ -0.64
MSH5-213ENST00000468136 KRT39Q6A163 491 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 RGMBQ6NW40 437 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 FBXO16Q8IX29 292 aaPredicted RBP11.08□□□□□ -0.64
MSH5-213ENST00000468136 REM2Q8IYK8 340 aaPredicted RBP11.08□□□□□ -0.64
MSH5-213ENST00000468136 TRIM58Q8NG06 486 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 SOCS4Q8WXH5 440 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 POMGNT1Q8WZA1 660 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 JAKMIP2Q96AA8 810 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 BICD1Q96G01 975 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 NAPGQ99747 312 aaPredicted RBP11.08□□□□□ -0.64
MSH5-213ENST00000468136 CBWD1Q9BRT8 395 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 IFIH1Q9BYX4 1025 aaKnown RBP11.08□□□□□ -0.64
MSH5-213ENST00000468136 ARHGAP20Q9P2F6 1191 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 APEX2Q9UBZ4 518 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 COQ4Q9Y3A0 265 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 Q9Y3F1 56 aa11.08□□□□□ -0.64
MSH5-213ENST00000468136 TMEM150BA6NC51 233 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 EPHB6O15197 1021 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 TACC1O75410 805 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 ARIH2O95376 493 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 EIF4A3P38919 411 aaKnown RBP11.07□□□□□ -0.64
MSH5-213ENST00000468136 ARHGAP25P42331 645 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 MAGEA1P43355 309 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 MXI1P50539 228 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 ZNF157P51786 506 aaPredicted RBP11.07□□□□□ -0.64
MSH5-213ENST00000468136 CLDN10P78369 228 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 ARHGAP1Q07960 439 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
MSH5-213ENST00000468136 PLCB4Q15147 1175 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 HSDL1Q3SXM5 330 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 DUSP28Q4G0W2 176 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 CST9Q5W186 159 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 HGSNATQ68CP4 663 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 DPY19L2P1Q6NXN4 242 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 TAPT1Q6NXT6 567 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 RASAL3Q86YV0 1011 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 CCDC155Q8N6L0 562 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 CEP112Q8N8E3 955 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 ACRBPQ8NEB7 543 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 BSNDQ8WZ55 320 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 DHX38Q92620 1227 aaKnown RBP11.07□□□□□ -0.64
MSH5-213ENST00000468136 MAML3Q96JK9 1138 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 ALS2CR12Q96Q35 445 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 TINF2Q9BSI4 451 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 CRACR2AQ9BSW2 395 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 MRPL4Q9BYD3 311 aaKnown RBP11.07□□□□□ -0.64
MSH5-213ENST00000468136 INTS2Q9H0H0 1204 aaKnown RBP11.07□□□□□ -0.64
MSH5-213ENST00000468136 ZFYVE28Q9HCC9 887 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 POLD4Q9HCU8 107 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 NLRC4Q9NPP4 1024 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 LZTFL1Q9NQ48 299 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 TSKSQ9UJT2 592 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 PCDHA13Q9Y5I0 950 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 ARID2Q68CP9 1835 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 ADGRA2Q96PE1 1338 aa11.07□□□□□ -0.64
MSH5-213ENST00000468136 TRPM7Q96QT4 1865 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 RRN3P2A6NIE6 340 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 LRRIQ4A6NIV6 560 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 URI1O94763 535 aaPredicted RBP11.06□□□□□ -0.64
MSH5-213ENST00000468136 ALDH1A1P00352 501 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 TUBBP07437 444 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 SLC10A3P09131 477 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 SLC9A1P19634 815 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 ADSSP30520 456 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 SOX5P35711 763 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 GPC3P51654 580 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 CYP24A1Q07973 514 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 MAP2K5Q13163 448 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 PSMD6Q15008 389 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 PCBP1Q15365 356 aaKnown RBP eCLIP11.06□□□□□ -0.64
MSH5-213ENST00000468136 MAPK6Q16659 721 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 WHAMMP3Q1A5X7 153 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 EPC2Q52LR7 807 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 ZNF569Q5MCW4 686 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 OLFML2BQ68BL8 750 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 EEPD1Q7L9B9 569 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 APBB1IPQ7Z5R6 666 aaPredicted RBP11.06□□□□□ -0.64
MSH5-213ENST00000468136 IFNLR1Q8IU57 520 aaPredicted RBP11.06□□□□□ -0.64
MSH5-213ENST00000468136 KSR1Q8IVT5 923 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 PARD3BQ8TEW8 1205 aa11.06□□□□□ -0.64
MSH5-213ENST00000468136 ZNF526Q8TF50 670 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms