RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 PHLPP2Q6ZVD8 1323 aa22.46■■□□□ 1.19
TMEM53-207ENST00000468117 USP27XA6NNY8 438 aa22.46■■□□□ 1.19
TMEM53-207ENST00000468117 PPFIA1Q13136 1202 aa22.46■■□□□ 1.19
TMEM53-207ENST00000468117 INTS8Q75QN2 995 aaKnown RBP22.46■■□□□ 1.19
TMEM53-207ENST00000468117 CBWD2Q8IUF1 395 aa22.46■■□□□ 1.19
TMEM53-207ENST00000468117 DNAJC7Q99615 494 aa22.46■■□□□ 1.19
TMEM53-207ENST00000468117 LSM14BQ9BX40 385 aaKnown RBP22.46■■□□□ 1.19
TMEM53-207ENST00000468117 TMEM134Q9H6X4 195 aa22.46■■□□□ 1.19
TMEM53-207ENST00000468117 A0A1W2PQJ5 194 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 SOWAHDA6NJG2 315 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 ADRB2P07550 413 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 KRT13P13646 458 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 AKR1A1P14550 325 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 DLG4P78352 724 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 ZBED6P86452 979 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 BEX3Q00994 111 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 KIF22Q14807 665 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 SNRNP35Q16560 246 aaKnown RBP22.45■■□□□ 1.18
TMEM53-207ENST00000468117 IQCDQ96DY2 449 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 NLRP4Q96MN2 994 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 NAA15Q9BXJ9 866 aaKnown RBP22.45■■□□□ 1.18
TMEM53-207ENST00000468117 AP5M1Q9H0R1 490 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 TRMT1Q9NXH9 659 aaKnown RBP22.45■■□□□ 1.18
TMEM53-207ENST00000468117 RNF186Q9NXI6 227 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 BRCA2P51587 3418 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 TRIP12Q14669 1992 aaPredicted RBP22.45■■□□□ 1.18
TMEM53-207ENST00000468117 MAGEB2O15479 319 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 NOL4O94818 638 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 FECHP22830 423 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 KCNJ6P48051 423 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 VEGFBP49765 207 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 MTF1Q14872 753 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 GRIK4Q16099 956 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 MFSD14CQ5VZR4 134 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 CDCA2Q69YH5 1023 aaPredicted RBP22.45■■□□□ 1.18
TMEM53-207ENST00000468117 PPP1R13LQ8WUF5 828 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 KAT2BQ92831 832 aa22.45■■□□□ 1.18
TMEM53-207ENST00000468117 TARS2Q9BW92 718 aaKnown RBP22.45■■□□□ 1.18
TMEM53-207ENST00000468117 F2P00734 622 aa22.44■■□□□ 1.18
TMEM53-207ENST00000468117 CYBAP13498 195 aa22.44■■□□□ 1.18
TMEM53-207ENST00000468117 SLC9A1P19634 815 aa22.44■■□□□ 1.18
TMEM53-207ENST00000468117 GARTP22102 1010 aa22.44■■□□□ 1.18
TMEM53-207ENST00000468117 FMO5P49326 533 aa22.44■■□□□ 1.18
TMEM53-207ENST00000468117 CPT1AP50416 773 aa22.44■■□□□ 1.18
TMEM53-207ENST00000468117 EFNA5P52803 228 aa22.44■■□□□ 1.18
TMEM53-207ENST00000468117 EXOC3L4Q17RC7 722 aa22.44■■□□□ 1.18
TMEM53-207ENST00000468117 MARCH8Q5T0T0 291 aa22.44■■□□□ 1.18
TMEM53-207ENST00000468117 MTHFD1LQ6UB35 978 aa22.44■■□□□ 1.18
TMEM53-207ENST00000468117 ZNF397Q8NF99 534 aaPredicted RBP22.44■■□□□ 1.18
TMEM53-207ENST00000468117 Q9Y3F1 56 aa22.44■■□□□ 1.18
TMEM53-207ENST00000468117 MAPK13O15264 365 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 PIGRP01833 764 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 VAMP7P51809 220 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 TRIM32Q13049 653 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 KIAA0753Q2KHM9 967 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 CBWD6Q4V339 395 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 CBWD3Q5JTY5 395 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 CBWD5Q5RIA9 395 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 ZBTB8OSQ8IWT0 167 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 CCAR2Q8N163 923 aaKnown RBP22.43■■□□□ 1.18
TMEM53-207ENST00000468117 LINC01465Q8N7H1 131 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 PLEKHO2Q8TD55 490 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 ZBTB45Q96K62 511 aaPredicted RBP22.43■■□□□ 1.18
TMEM53-207ENST00000468117 CCDC113Q9H0I3 377 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 SETD4Q9NVD3 440 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 TTLL13PA6NNM8 815 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 ACTN1P12814 892 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 MAP2K2P36507 400 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 TFDP1Q14186 410 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 WDR59Q6PJI9 974 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 GBP6Q6ZN66 633 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 FBXL18Q96ME1 805 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 CFHR5Q9BXR6 569 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 HAPLN2Q9GZV7 340 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 NLRC4Q9NPP4 1024 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 GCNT4Q9P109 453 aa22.43■■□□□ 1.18
TMEM53-207ENST00000468117 TULP1O00294 542 aaPredicted RBP22.42■■□□□ 1.18
TMEM53-207ENST00000468117 MSCO60682 206 aa22.42■■□□□ 1.18
TMEM53-207ENST00000468117 PON1P27169 355 aa22.42■■□□□ 1.18
TMEM53-207ENST00000468117 TSR1Q2NL82 804 aaKnown RBP22.42■■□□□ 1.18
TMEM53-207ENST00000468117 RAD9BQ6WBX8 426 aa22.42■■□□□ 1.18
TMEM53-207ENST00000468117 TOGARAM2Q6ZUX3 1019 aa22.42■■□□□ 1.18
TMEM53-207ENST00000468117 CACNA2D4Q7Z3S7 1137 aa22.42■■□□□ 1.18
TMEM53-207ENST00000468117 GPD1LQ8N335 351 aa22.42■■□□□ 1.18
TMEM53-207ENST00000468117 PPP1R16BQ96T49 567 aa22.42■■□□□ 1.18
TMEM53-207ENST00000468117 CHP1Q99653 195 aa22.42■■□□□ 1.18
TMEM53-207ENST00000468117 ANKFY1Q9P2R3 1169 aa22.42■■□□□ 1.18
TMEM53-207ENST00000468117 AKT3Q9Y243 479 aa22.42■■□□□ 1.18
TMEM53-207ENST00000468117 STYXL1Q9Y6J8 313 aa22.42■■□□□ 1.18
TMEM53-207ENST00000468117 GTPBP10A4D1E9 387 aaKnown RBP22.41■■□□□ 1.18
TMEM53-207ENST00000468117 ASAP2O43150 1006 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 MYL3P08590 195 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 POLR2FP61218 127 aaKnown RBP22.41■■□□□ 1.18
TMEM53-207ENST00000468117 FSCN1Q16658 493 aaKnown RBP22.41■■□□□ 1.18
TMEM53-207ENST00000468117 C1orf220Q5T0J3 134 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 CYP26C1Q6V0L0 522 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 TMTC1Q8IUR5 882 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 BAP1Q92560 729 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 FAM213AQ9BRX8 229 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 C2orf40Q9H1Z8 148 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms