RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 SPATA31A5Q5VU36 1347 aa16.74■□□□□ 0.27
CHD1L-205ENST00000467213 SPATA31A6Q5VVP1 1343 aa16.74■□□□□ 0.27
CHD1L-205ENST00000467213 SPATA31A7Q8IWB4 1347 aa16.74■□□□□ 0.27
CHD1L-205ENST00000467213 ADGRA3Q8IWK6 1321 aa16.74■□□□□ 0.27
CHD1L-205ENST00000467213 P4HA2O15460 535 aa16.74■□□□□ 0.27
CHD1L-205ENST00000467213 ITIH2P19823 946 aa16.74■□□□□ 0.27
CHD1L-205ENST00000467213 CTTNQ14247 550 aaKnown RBP16.74■□□□□ 0.27
CHD1L-205ENST00000467213 THOC1Q96FV9 657 aaKnown RBP16.74■□□□□ 0.27
CHD1L-205ENST00000467213 TXLNGQ9NUQ3 528 aa16.74■□□□□ 0.27
CHD1L-205ENST00000467213 ZMYM2Q9UBW7 1377 aa16.74■□□□□ 0.27
CHD1L-205ENST00000467213 FRMPD2Q68DX3 1309 aaPredicted RBP16.73■□□□□ 0.27
CHD1L-205ENST00000467213 MAGEB2O15479 319 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 UNC5CO95185 931 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 GZMAP12544 262 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 PRPF4BQ13523 1007 aaKnown RBP16.73■□□□□ 0.27
CHD1L-205ENST00000467213 CAPRIN2Q6IMN6 1127 aaKnown RBP16.73■□□□□ 0.27
CHD1L-205ENST00000467213 TTC27Q6P3X3 843 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 INPP5DQ92835 1189 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 AGPAT1Q99943 283 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 THAP2Q9H0W7 228 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 L3MBTL1Q9Y468 752 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 KRT16P08779 473 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 KRT13P13646 458 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 IL1R1P14778 569 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 RXRBP28702 533 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 CIITAP33076 1130 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 CASP4P49662 377 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 MTFR1Q15390 333 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 TCERG1LQ5VWI1 586 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 RGS9BPQ6ZS82 235 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 RIBC1Q8N443 379 aaPredicted RBP16.73■□□□□ 0.27
CHD1L-205ENST00000467213 ARHGEF2Q92974 986 aaKnown RBP16.73■□□□□ 0.27
CHD1L-205ENST00000467213 ADAM22Q9P0K1 906 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 NRAPQ86VF7 1730 aa16.73■□□□□ 0.27
CHD1L-205ENST00000467213 TMEM120BA0PK00 339 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 TCP11X1B4DZS4 312 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 PMM2O15305 246 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 GPC5P78333 572 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 RRP1BQ14684 758 aaKnown RBP16.72■□□□□ 0.27
CHD1L-205ENST00000467213 SIX1Q15475 284 aaPredicted RBP16.72■□□□□ 0.27
CHD1L-205ENST00000467213 POTEGQ6S5H5 508 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 PPP1R21Q6ZMI0 780 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 ARHGEF18Q6ZSZ5 1173 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 STXBP4Q6ZWJ1 553 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 SLC13A5Q86YT5 568 aaPredicted RBP16.72■□□□□ 0.27
CHD1L-205ENST00000467213 AGGF1Q8N302 714 aaeCLIP16.72■□□□□ 0.27
CHD1L-205ENST00000467213 SAAL1Q96ER3 474 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 ANO3Q9BYT9 981 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 TBCAO75347 108 aaKnown RBP16.72■□□□□ 0.27
CHD1L-205ENST00000467213 RFC4P35249 363 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 CACNB1Q02641 598 aaPredicted RBP16.72■□□□□ 0.27
CHD1L-205ENST00000467213 MAP2K1Q02750 393 aaPredicted RBP16.72■□□□□ 0.27
CHD1L-205ENST00000467213 CALCOCO2Q13137 446 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 CEP128Q6ZU80 1094 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 MIGA2Q7L4E1 593 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 ZNF483Q8TF39 744 aaPredicted RBP16.72■□□□□ 0.27
CHD1L-205ENST00000467213 DYDC1Q8WWB3 177 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 MAIP1Q8WWC4 291 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 FAM212AQ96EL1 285 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 INTS2Q9H0H0 1204 aaKnown RBP16.72■□□□□ 0.27
CHD1L-205ENST00000467213 LRMDAQ9H2I8 198 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 KCND2Q9NZV8 630 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 KLHL14Q9P2G3 628 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 NARFQ9UHQ1 456 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 DIAPH2O60879 1101 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 FOSP01100 380 aaPredicted RBP16.72■□□□□ 0.27
CHD1L-205ENST00000467213 BCRP11274 1271 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 ANKRD20A2Q5SQ80 823 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 ANKRD20A1Q5TYW2 823 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 ANKRD20A3Q5VUR7 823 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 TBC1D9BQ66K14 1250 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 GJB7Q6PEY0 223 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 DNAAF5Q86Y56 855 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 FITM2Q8N6M3 262 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 FBF1Q8TES7 1133 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 SPATS2LQ9NUQ6 558 aaKnown RBP16.72■□□□□ 0.27
CHD1L-205ENST00000467213 FGFR1OP2Q9NVK5 253 aa16.72■□□□□ 0.27
CHD1L-205ENST00000467213 GNAZP19086 355 aa16.71■□□□□ 0.27
CHD1L-205ENST00000467213 PTPROQ16827 1216 aa16.71■□□□□ 0.27
CHD1L-205ENST00000467213 RC3H1Q5TC82 1133 aaKnown RBP16.71■□□□□ 0.27
CHD1L-205ENST00000467213 TPTE2Q6XPS3 522 aa16.71■□□□□ 0.27
CHD1L-205ENST00000467213 ENDOVQ8N8Q3 282 aaKnown RBP16.71■□□□□ 0.27
CHD1L-205ENST00000467213 SPDL1Q96EA4 605 aa16.71■□□□□ 0.27
CHD1L-205ENST00000467213 PLVAPQ9BX97 442 aa16.71■□□□□ 0.27
CHD1L-205ENST00000467213 ANKIB1Q9P2G1 1089 aa16.71■□□□□ 0.27
CHD1L-205ENST00000467213 TTC4O95801 387 aa16.71■□□□□ 0.26
CHD1L-205ENST00000467213 STRN3Q13033 797 aa16.71■□□□□ 0.26
CHD1L-205ENST00000467213 ZDHHC14Q8IZN3 488 aa16.71■□□□□ 0.26
CHD1L-205ENST00000467213 SH3GL3Q99963 347 aa16.71■□□□□ 0.26
CHD1L-205ENST00000467213 FOXP3Q9BZS1 431 aa16.71■□□□□ 0.26
CHD1L-205ENST00000467213 CDC42EP4Q9H3Q1 356 aaKnown RBP16.71■□□□□ 0.26
CHD1L-205ENST00000467213 STARD13Q9Y3M8 1113 aa16.71■□□□□ 0.26
CHD1L-205ENST00000467213 FSCN2O14926 492 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 ECEL1O95672 775 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 FGFR4P22455 802 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 YARSP54577 528 aaKnown RBP16.7■□□□□ 0.26
CHD1L-205ENST00000467213 NR1H3Q13133 447 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 GRIK5Q16478 980 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 NUGGCQ68CJ6 796 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 LARGE2Q8N3Y3 721 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms