RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 GPR75-ASB3A0A0A6YYF3 556 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 PPP1R11O60927 126 aaPredicted RBP21.22■□□□□ 0.99
SDF4-205ENST00000465727 KIF22Q14807 665 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 CCDC38Q502W7 563 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 VSTM1Q6UX27 236 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 FAM186BQ8IYM0 893 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 UHMK1Q8TAS1 419 aaKnown RBP21.22■□□□□ 0.99
SDF4-205ENST00000465727 FBF1Q8TES7 1133 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 STK38LQ9Y2H1 464 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 PCDHB13Q9Y5F0 798 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 ZBTB5O15062 677 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 TBX3O15119 743 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 EIF3DO15371 548 aaKnown RBP eCLIP21.22■□□□□ 0.99
SDF4-205ENST00000465727 ATP5HO75947 161 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 UNC5CO95185 931 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 COILP38432 576 aaPredicted RBP21.22■□□□□ 0.99
SDF4-205ENST00000465727 FMO5P49326 533 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 LRRC14Q15048 493 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 SPICE1Q8N0Z3 855 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 KCTD17Q8N5Z5 321 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 C12orf50Q8NA57 414 aaPredicted RBP21.22■□□□□ 0.99
SDF4-205ENST00000465727 GPR88Q9GZN0 384 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 WNT8AQ9H1J5 351 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 TXLNGQ9NUQ3 528 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 GGT7Q9UJ14 662 aa21.22■□□□□ 0.99
SDF4-205ENST00000465727 TBCAO75347 108 aaKnown RBP21.21■□□□□ 0.99
SDF4-205ENST00000465727 GAP43P17677 238 aa21.21■□□□□ 0.99
SDF4-205ENST00000465727 SARNPP82979 210 aaKnown RBP21.21■□□□□ 0.99
SDF4-205ENST00000465727 PARP6Q2NL67 630 aa21.21■□□□□ 0.99
SDF4-205ENST00000465727 UBAP2Q5T6F2 1119 aaKnown RBP21.21■□□□□ 0.99
SDF4-205ENST00000465727 CCDC105Q8IYK2 499 aa21.21■□□□□ 0.99
SDF4-205ENST00000465727 KIF2BQ8N4N8 673 aa21.21■□□□□ 0.99
SDF4-205ENST00000465727 WHRNQ9P202 907 aa21.21■□□□□ 0.99
SDF4-205ENST00000465727 APEX2Q9UBZ4 518 aa21.21■□□□□ 0.99
SDF4-205ENST00000465727 A6NHS1 94 aa21.2■□□□□ 0.99
SDF4-205ENST00000465727 ABLIM1O14639 778 aa21.2■□□□□ 0.99
SDF4-205ENST00000465727 GCNT3O95395 438 aa21.2■□□□□ 0.99
SDF4-205ENST00000465727 SPIRE1Q08AE8 756 aa21.2■□□□□ 0.99
SDF4-205ENST00000465727 PABPC4Q13310 644 aaKnown RBP eCLIP21.2■□□□□ 0.997e-7■■■■□ 19.7
SDF4-205ENST00000465727 CMPK2Q5EBM0 449 aa21.2■□□□□ 0.99
SDF4-205ENST00000465727 GPATCH4Q5T3I0 446 aaKnown RBP21.2■□□□□ 0.99
SDF4-205ENST00000465727 APLFQ8IW19 511 aaPredicted RBP21.2■□□□□ 0.99
SDF4-205ENST00000465727 SLCO2A1Q92959 643 aa21.2■□□□□ 0.99
SDF4-205ENST00000465727 VTI1AQ96AJ9 217 aa21.2■□□□□ 0.99
SDF4-205ENST00000465727 MAGEB18Q96M61 343 aa21.2■□□□□ 0.99
SDF4-205ENST00000465727 CDC42EP4Q9H3Q1 356 aaKnown RBP21.2■□□□□ 0.99
SDF4-205ENST00000465727 GPCPD1Q9NPB8 672 aa21.2■□□□□ 0.99
SDF4-205ENST00000465727 A8MUI8 341 aa21.2■□□□□ 0.98
SDF4-205ENST00000465727 HIP1RO75146 1068 aa21.2■□□□□ 0.98
SDF4-205ENST00000465727 TCEA3O75764 348 aa21.2■□□□□ 0.98
SDF4-205ENST00000465727 PEX5P50542 639 aa21.2■□□□□ 0.98
SDF4-205ENST00000465727 RRP1BQ14684 758 aaKnown RBP21.2■□□□□ 0.98
SDF4-205ENST00000465727 LONRF1Q17RB8 773 aa21.2■□□□□ 0.98
SDF4-205ENST00000465727 ARHGEF18Q6ZSZ5 1173 aa21.2■□□□□ 0.98
SDF4-205ENST00000465727 MGARPQ8TDB4 240 aa21.2■□□□□ 0.98
SDF4-205ENST00000465727 NAF1Q96HR8 494 aaKnown RBP21.2■□□□□ 0.98
SDF4-205ENST00000465727 C8orf37Q96NL8 207 aa21.2■□□□□ 0.98
SDF4-205ENST00000465727 KIF9Q9HAQ2 790 aa21.2■□□□□ 0.98
SDF4-205ENST00000465727 CTTNBP2NLQ9P2B4 639 aa21.2■□□□□ 0.98
SDF4-205ENST00000465727 FOCADQ5VW36 1801 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 ECEL1O95672 775 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 STAT3P40763 770 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 CTTNQ14247 550 aaKnown RBP21.19■□□□□ 0.98
SDF4-205ENST00000465727 TAF11Q15544 211 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 ZNF804AQ7Z570 1209 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 LRRC47Q8N1G4 583 aaKnown RBP21.19■□□□□ 0.98
SDF4-205ENST00000465727 KRT35Q92764 455 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 TGS1Q96RS0 853 aaKnown RBP21.19■□□□□ 0.98
SDF4-205ENST00000465727 TAS2R14Q9NYV8 317 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 PNMA3Q9UL41 463 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 RTCBQ9Y3I0 505 aaKnown RBP21.19■□□□□ 0.98
SDF4-205ENST00000465727 IGKV6D-41A0A0C4DH26 115 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 CLIC2O15247 247 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 TGFB1I1O43294 461 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 MTA2O94776 668 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 MTFR1Q15390 333 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 SLC15A2Q16348 729 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 GRIK5Q16478 980 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 AADACL2Q6P093 401 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 AGPAT1Q99943 283 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 INTS2Q9H0H0 1204 aaKnown RBP21.19■□□□□ 0.98
SDF4-205ENST00000465727 SEPT11Q9NVA2 429 aaKnown RBP21.19■□□□□ 0.98
SDF4-205ENST00000465727 ZFATQ9P243 1243 aa21.19■□□□□ 0.98
SDF4-205ENST00000465727 COL24A1Q17RW2 1714 aa21.18■□□□□ 0.98
SDF4-205ENST00000465727 SOCS7O14512 581 aa21.18■□□□□ 0.98
SDF4-205ENST00000465727 SPATA31C1P0DKV0 1188 aa21.18■□□□□ 0.98
SDF4-205ENST00000465727 PSMC6P62333 389 aa21.18■□□□□ 0.98
SDF4-205ENST00000465727 GPC5P78333 572 aa21.18■□□□□ 0.98
SDF4-205ENST00000465727 MIGA2Q7L4E1 593 aa21.18■□□□□ 0.98
SDF4-205ENST00000465727 SLC13A5Q86YT5 568 aaPredicted RBP21.18■□□□□ 0.98
SDF4-205ENST00000465727 ZDHHC14Q8IZN3 488 aa21.18■□□□□ 0.98
SDF4-205ENST00000465727 ETNPPLQ8TBG4 499 aa21.18■□□□□ 0.98
SDF4-205ENST00000465727 LRRC42Q9Y546 428 aa21.18■□□□□ 0.98
SDF4-205ENST00000465727 ACTL7BQ9Y614 415 aa21.18■□□□□ 0.98
SDF4-205ENST00000465727 STX2P32856 288 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 STRN3Q13033 797 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 AP3B2Q13367 1082 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 PPP1R21Q6ZMI0 780 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 CCDC25Q86WR0 208 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 AGGF1Q8N302 714 aaeCLIP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms