RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 SLC39A4Q6P5W5 647 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 RSPH3Q86UC2 560 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 ZBTB8OSQ8IWT0 167 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 C12orf56Q8IXR9 622 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 TMEM40Q8WWA1 233 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 GBP3Q9H0R5 595 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 HSD3B7Q9H2F3 369 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 TYW1Q9NV66 732 aaKnown RBP15.76■□□□□ 0.11
COL6A1-202ENST00000463060 DMAC2Q9NW81 257 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 CTNND2Q9UQB3 1225 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 CDY2AQ9Y6F7 541 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 STYXL1Q9Y6J8 313 aa15.76■□□□□ 0.11
COL6A1-202ENST00000463060 MROH7Q68CQ1 1323 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 FSD2A1L4K1 749 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 CCDC85CA6NKD9 419 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 ANKRD63C9JTQ0 380 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 ACKR2O00590 384 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 CSDE1O75534 798 aaKnown RBP15.75■□□□□ 0.11
COL6A1-202ENST00000463060 EIF4BP23588 611 aaKnown RBP15.75■□□□□ 0.11
COL6A1-202ENST00000463060 ADSSP30520 456 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 ATN1P54259 1190 aaPredicted RBP15.75■□□□□ 0.11
COL6A1-202ENST00000463060 TLE2Q04725 743 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 FAAP100Q0VG06 881 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 MAPK6Q16659 721 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 EDRF1Q3B7T1 1238 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 SPATA1Q5VX52 437 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 NECAB2Q7Z6G3 386 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 LUZP1Q86V48 1076 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 NLRP7Q8WX94 980 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 PPP1R16BQ96T49 567 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 OSMRQ99650 979 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 GCOM2Q9BZD3 368 aaPredicted RBP15.75■□□□□ 0.11
COL6A1-202ENST00000463060 AGPAT3Q9NRZ7 376 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 PRMT7Q9NVM4 692 aaPredicted RBP15.75■□□□□ 0.11
COL6A1-202ENST00000463060 TRPV2Q9Y5S1 764 aa15.75■□□□□ 0.11
COL6A1-202ENST00000463060 BICDL2A1A5D9 508 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 INO80B-WBP1J3KQ70 363 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 ABLIM1O14639 778 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 PRKCBP05771 671 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 CKBP12277 381 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 THPOP40225 353 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 MYL5Q02045 173 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 PCBP1Q15365 356 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL6A1-202ENST00000463060 LRRC26Q2I0M4 334 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 TRIM60Q495X7 471 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 ZNF618Q5T7W0 954 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 ZPBP2Q6X784 338 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 LRRC55Q6ZSA7 311 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 IRF2BP1Q8IU81 584 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 SLC9A9Q8IVB4 645 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 AOPEPQ8N6M6 819 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 PRIMPOLQ96LW4 560 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 ACO2Q99798 780 aaKnown RBP15.74■□□□□ 0.11
COL6A1-202ENST00000463060 TARS2Q9BW92 718 aaKnown RBP15.74■□□□□ 0.11
COL6A1-202ENST00000463060 OSBPL7Q9BZF2 842 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 INO80BQ9C086 356 aaPredicted RBP15.74■□□□□ 0.11
COL6A1-202ENST00000463060 PTPRHQ9HD43 1115 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 CGNQ9P2M7 1197 aaKnown RBP15.74■□□□□ 0.11
COL6A1-202ENST00000463060 EXOC7Q9UPT5 735 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 NOD1Q9Y239 953 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 USP20Q9Y2K6 914 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 SQORQ9Y6N5 450 aa15.74■□□□□ 0.11
COL6A1-202ENST00000463060 SMTNL1A8MU46 457 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 TISP43B9A030 160 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 B4GALT5O43286 388 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 PROZP22891 400 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 HOXA11P31270 313 aaPredicted RBP15.73■□□□□ 0.11
COL6A1-202ENST00000463060 STRN3Q13033 797 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 MYBPC2Q14324 1141 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 GPNMBQ14956 572 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 TSHZ1Q6ZSZ6 1077 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 GOLGA5Q8TBA6 731 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 CAGE1Q8TC20 777 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 HAPLN2Q9GZV7 340 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 FANCLQ9NW38 375 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 NOC2LQ9Y3T9 749 aaKnown RBP15.73■□□□□ 0.11
COL6A1-202ENST00000463060 NFE2L3Q9Y4A8 694 aa15.73■□□□□ 0.11
COL6A1-202ENST00000463060 CNTNAP2Q9UHC6 1331 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 DCDC2CA8MYV0 355 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 PITPNM1O00562 1244 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 TLR3O15455 904 aaKnown RBP15.72■□□□□ 0.11
COL6A1-202ENST00000463060 TSPAN1O60635 241 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 PQBP1O60828 265 aaKnown RBP15.72■□□□□ 0.11
COL6A1-202ENST00000463060 ZNF18P17022 549 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 FGFR4P22455 802 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 MCCD1P59942 119 aaPredicted RBP15.72■□□□□ 0.11
COL6A1-202ENST00000463060 FKBP3Q00688 224 aaKnown RBP15.72■□□□□ 0.11
COL6A1-202ENST00000463060 MBTPS1Q14703 1052 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 FBXO47Q5MNV8 452 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 CDKAL1Q5VV42 579 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 HS2ST1Q7LGA3 356 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 FAM228AQ86W67 206 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 SYCP3Q8IZU3 236 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 RNF214Q8ND24 703 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 NOC4LQ9BVI4 516 aaKnown RBP15.72■□□□□ 0.11
COL6A1-202ENST00000463060 MRPL4Q9BYD3 311 aaKnown RBP15.72■□□□□ 0.11
COL6A1-202ENST00000463060 SAMSN1Q9NSI8 373 aaKnown RBP15.72■□□□□ 0.11
COL6A1-202ENST00000463060 TBX21Q9UL17 535 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 TNFSF13BQ9Y275 285 aa15.72■□□□□ 0.11
COL6A1-202ENST00000463060 A0A0B4J269 797 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms