RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 MTMR3Q13615 1198 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 DCAF15Q66K64 600 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 RNF207Q6ZRF8 634 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 OTUD6AQ7L8S5 288 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 NLRX1Q86UT6 975 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 KSR1Q8IVT5 923 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 FAM71AQ8IYT1 594 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 CCDC43Q96MW1 224 aaKnown RBP10.68□□□□□ -0.7
DHFR2-203ENST00000461173 GDAP1L1Q96MZ0 367 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 TAAR1Q96RJ0 339 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 RMDN3Q96TC7 470 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 MOV10L1Q9BXT6 1211 aaKnown RBP10.68□□□□□ -0.7
DHFR2-203ENST00000461173 IKZF4Q9H2S9 585 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 AS3MTQ9HBK9 375 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 FAM114A2Q9NRY5 505 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 ADAMTS5Q9UNA0 930 aa10.68□□□□□ -0.7
DHFR2-203ENST00000461173 FER1L6Q2WGJ9 1857 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 LTBP3Q9NS15 1303 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 TMCO5BA8MYB1 307 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 KRIT1O00522 736 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 VWA5AO00534 786 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 ZEB2O60315 1214 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 ZC3H11AO75152 810 aaKnown RBP eCLIP10.67□□□□□ -0.7
DHFR2-203ENST00000461173 RTN2O75298 545 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 CHRM1P11229 460 aaPredicted RBP10.67□□□□□ -0.7
DHFR2-203ENST00000461173 ECHS1P30084 290 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 CCND2P30279 289 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 GPC3P51654 580 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 POU5F1Q01860 360 aaKnown RBP10.67□□□□□ -0.7
DHFR2-203ENST00000461173 PPP3CAQ08209 521 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 SPP2Q13103 211 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 DMP1Q13316 513 aaPredicted RBP10.67□□□□□ -0.7
DHFR2-203ENST00000461173 LRRC31Q6UY01 552 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 ENOSF1Q7L5Y1 443 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 TMEM161BQ8NDZ6 487 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 RIN2Q8WYP3 895 aaPredicted RBP10.67□□□□□ -0.7
DHFR2-203ENST00000461173 SHC3Q92529 594 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 MFSD14AQ96MC6 490 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 ZIM3Q96PE6 472 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 TRERF1Q96PN7 1200 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 CBWD1Q9BRT8 395 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 TAOK3Q9H2K8 898 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 RAVER2Q9HCJ3 691 aaKnown RBP10.67□□□□□ -0.7
DHFR2-203ENST00000461173 TMEM8AQ9HCN3 771 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 UBE2TQ9NPD8 197 aaPredicted RBP10.67□□□□□ -0.7
DHFR2-203ENST00000461173 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.67□□□□□ -0.7
DHFR2-203ENST00000461173 TBX20Q9UMR3 447 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 SAMM50Q9Y512 469 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 CTDP1Q9Y5B0 961 aaPredicted RBP10.67□□□□□ -0.7
DHFR2-203ENST00000461173 PCDHA10Q9Y5I2 948 aa10.67□□□□□ -0.7
DHFR2-203ENST00000461173 MYPNQ86TC9 1320 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 SYNGAP1Q96PV0 1343 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 GOLGA6L10A0A0M3HER8 536 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 FAM187AA6NFU0 413 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 HMGB1P1B2RPK0 211 aaPredicted RBP10.66□□□□□ -0.7
DHFR2-203ENST00000461173 DDX39AO00148 427 aaKnown RBP10.66□□□□□ -0.7
DHFR2-203ENST00000461173 BACH1O14867 736 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 KIAA0391O15091 583 aaKnown RBP10.66□□□□□ -0.7
DHFR2-203ENST00000461173 GARTP22102 1010 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 GBP1P32455 592 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 MFAP3P55082 362 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 BACE1P56817 501 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 PTENP60484 403 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 ERVK-9P63128 1117 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 GPC5P78333 572 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 KRT39Q6A163 491 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 MCPH1Q8NEM0 835 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 REPS2Q8NFH8 660 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 PIK3R5Q8WYR1 880 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 ATP6V0A1Q93050 837 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 FAM129AQ9BZQ8 928 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 TMEM117Q9H0C3 514 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 RAB17Q9H0T7 212 aa10.66□□□□□ -0.7
DHFR2-203ENST00000461173 RPAP3Q9H6T3 665 aaPredicted RBP10.66□□□□□ -0.7
DHFR2-203ENST00000461173 BCCIPQ9P287 314 aaKnown RBP eCLIP10.66□□□□□ -0.7
DHFR2-203ENST00000461173 PARP14Q460N5 1801 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 C19orf81C9J6K1 198 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 CCNE2O96020 404 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 FAM153BP0C7A2 387 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 EIF2AK2P19525 551 aaKnown RBP10.65□□□□□ -0.7
DHFR2-203ENST00000461173 DHX34Q14147 1143 aaKnown RBP10.65□□□□□ -0.7
DHFR2-203ENST00000461173 FAM153CQ494X1 144 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 BRDTQ58F21 947 aaPredicted RBP10.65□□□□□ -0.7
DHFR2-203ENST00000461173 ARHGEF16Q5VV41 709 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 KDM7AQ6ZMT4 941 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 PAXIP1Q6ZW49 1069 aaPredicted RBP10.65□□□□□ -0.7
DHFR2-203ENST00000461173 KLHL7Q8IXQ5 586 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 SCYL3Q8IZE3 742 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 CPXCR1Q8N123 301 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 PARD3BQ8TEW8 1205 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 IFT81Q8WYA0 676 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 DHX38Q92620 1227 aaKnown RBP10.65□□□□□ -0.7
DHFR2-203ENST00000461173 RUNDC3BQ96NL0 473 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 CAPS2Q9BXY5 557 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 KIAA1586Q9HCI6 787 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 OSGEPQ9NPF4 335 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 PDLIM7Q9NR12 457 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 FAM153AQ9UHL3 310 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 DOCK1Q14185 1865 aa10.65□□□□□ -0.7
DHFR2-203ENST00000461173 ZNF233A6NK53 670 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms