RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 ZNF792Q3KQV3 632 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 CELF3Q5SZQ8 465 aaKnown RBP11.85□□□□□ -0.51
IFT88-204ENST00000461115 C10orf76Q5T2E6 689 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 FAM160B1Q5W0V3 765 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 PAPD7Q5XG87 772 aaKnown RBP11.85□□□□□ -0.51
IFT88-204ENST00000461115 SMYD5Q6GMV2 418 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 SLC39A4Q6P5W5 647 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 SEPT14Q6ZU15 432 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 TAS1R3Q7RTX0 852 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 MTERF4Q7Z6M4 381 aaKnown RBP11.85□□□□□ -0.51
IFT88-204ENST00000461115 SLC35F6Q8N357 371 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 RNF10Q8N5U6 811 aaKnown RBP11.85□□□□□ -0.51
IFT88-204ENST00000461115 GPRC5AQ8NFJ5 357 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 JAKMIP2Q96AA8 810 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 MFSD14AQ96MC6 490 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 CBWD1Q9BRT8 395 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 KMT5AQ9NQR1 393 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 NRBP2Q9NSY0 501 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 DIS3Q9Y2L1 958 aaKnown RBP11.85□□□□□ -0.51
IFT88-204ENST00000461115 PCDHA13Q9Y5I0 950 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 ZSWIM8A7E2V4 1837 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 DENND3A2RUS2 1198 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 CTAGE9A4FU28 777 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 EFCAB8A8MWE9 144 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 BTBD19C9JJ37 291 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 MAFO75444 373 aaPredicted RBP11.84□□□□□ -0.51
IFT88-204ENST00000461115 URI1O94763 535 aaPredicted RBP11.84□□□□□ -0.51
IFT88-204ENST00000461115 ARIH2O95376 493 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 GGPS1O95749 300 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 GTF2H1P32780 548 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 NAMPTP43490 491 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 CYP2J2P51589 502 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 STAT5BP51692 787 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 TUBB4BP68371 445 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 CLDN10P78369 228 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 CCNA1P78396 465 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 KIF5AQ12840 1032 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 IRF5Q13568 498 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 CBWD6Q4V339 395 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 EPC2Q52LR7 807 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 DCAF17Q5H9S7 520 aaPredicted RBP11.84□□□□□ -0.51
IFT88-204ENST00000461115 CBWD3Q5JTY5 395 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 ZNF569Q5MCW4 686 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 CBWD5Q5RIA9 395 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 CCDC122Q5T0U0 273 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 MAP1SQ66K74 1059 aaPredicted RBP11.84□□□□□ -0.51
IFT88-204ENST00000461115 MAMDC4Q6UXC1 1216 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 MAEAQ7L5Y9 396 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 EXOC8Q8IYI6 725 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 OLIG1Q8TAK6 271 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 PLEKHO2Q8TD55 490 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 BRI3BPQ8WY22 251 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
IFT88-204ENST00000461115 IFT74Q96LB3 600 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 GPR20Q99678 358 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 NAPGQ99747 312 aaPredicted RBP11.84□□□□□ -0.51
IFT88-204ENST00000461115 SH2D3AQ9BRG2 576 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 SYT11Q9BT88 431 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 STK33Q9BYT3 514 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 IFIH1Q9BYX4 1025 aaKnown RBP11.84□□□□□ -0.51
IFT88-204ENST00000461115 TMEM134Q9H6X4 195 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 GBA2Q9HCG7 927 aaPredicted RBP11.84□□□□□ -0.51
IFT88-204ENST00000461115 GCNT4Q9P109 453 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 SEPT9Q9UHD8 586 aaPredicted RBP11.84□□□□□ -0.51
IFT88-204ENST00000461115 FHOD1Q9Y613 1164 aa11.84□□□□□ -0.51
IFT88-204ENST00000461115 TISP43B9A030 160 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 ANKRD63C9JTQ0 380 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 AKR1B10O60218 316 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 PGK2P07205 417 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 ACTN1P12814 892 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 KRT13P13646 458 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 PRLRP16471 622 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 MAGEA1P43355 309 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 VAMP7P51809 220 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 APBA1Q02410 837 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 HSP90AA2PQ14568 343 aaPredicted RBP11.83□□□□□ -0.52
IFT88-204ENST00000461115 ASIC2Q16515 512 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 TCERG1LQ5VWI1 586 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 SPRYD7Q5W111 196 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 IQCEQ6IPM2 695 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 RSRC2Q7L4I2 434 aaKnown RBP11.83□□□□□ -0.52
IFT88-204ENST00000461115 TRAPPC11Q7Z392 1133 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 PTCD2Q8WV60 388 aaKnown RBP11.83□□□□□ -0.52
IFT88-204ENST00000461115 EMID1Q96A84 441 aaPredicted RBP11.83□□□□□ -0.52
IFT88-204ENST00000461115 MAP7D2Q96T17 732 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 GPR88Q9GZN0 384 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 KATNBL1Q9H079 304 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 POLR3FQ9H1D9 316 aaPredicted RBP11.83□□□□□ -0.52
IFT88-204ENST00000461115 KIAA1586Q9HCI6 787 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 APEX2Q9UBZ4 518 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 LHX6Q9UPM6 363 aa11.83□□□□□ -0.52
IFT88-204ENST00000461115 DOCK3Q8IZD9 2030 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 CCDC169A6NNP5 214 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 ZBTB42B2RXF5 422 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 PDHXO00330 501 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 ADRB2P07550 413 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 FERP16591 822 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 GLRA2P23416 452 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 TCF7P36402 384 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms