RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 GPD1LQ8N335 351 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 RDH13Q8NBN7 331 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 CACTINQ8WUQ7 758 aaKnown RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 CPLX3Q8WVH0 158 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 TRIB2Q92519 343 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 CCDC51Q96ER9 411 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 PRIMPOLQ96LW4 560 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 SPAG5Q96R06 1193 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZIC5Q96T25 663 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 C16orf70Q9BSU1 422 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 TSEN34Q9BSV6 310 aaKnown RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 MSTO1Q9BUK6 570 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 NAA15Q9BXJ9 866 aaKnown RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 ARHGAP39Q9C0H5 1083 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 FAM49AQ9H0Q0 323 aaPredicted RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 SEMA6BQ9H3T3 888 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 POLD4Q9HCU8 107 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 SETD4Q9NVD3 440 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 TAB2Q9NYJ8 693 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 ANKFY1Q9P2R3 1169 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 GNEQ9Y223 722 aaKnown RBP6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 DAAM1Q9Y4D1 1078 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 PCDHA2Q9Y5H9 948 aa6.37□□□□□ -1.39
RNU1-88P-201ENST00000459274 MROH7Q68CQ1 1323 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 A0A1W2PQC6 194 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 TMEM150BA6NC51 233 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 AKR1B15C9JRZ8 316 aaPredicted RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 XPOTO43592 962 aaKnown RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 TOM1L1O75674 476 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 PGK1P00558 417 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 TNNC2P02585 160 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 TFRCP02786 760 aaKnown RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 PRKCBP05771 671 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 ASGR1P07306 291 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 ATP1A3P13637 1013 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 ARL2P36404 184 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 VAMP7P51809 220 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 NLRP11P59045 1033 aaKnown RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 PURAQ00577 322 aaKnown RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 BEX3Q00994 111 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 KCNH2Q12809 1159 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 NR1I3Q14994 352 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 NCAPHQ15003 741 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 TARBP2Q15633 366 aaKnown RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 KCNA10Q16322 511 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 ATF7IP2Q5U623 682 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 FAM43BQ6ZT52 329 aaPredicted RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 EPM2AIP1Q7L775 607 aaPredicted RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 CATSPER4Q7RTX7 472 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 CCDC186Q7Z3E2 898 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 SLC9A9Q8IVB4 645 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 MAP4K3Q8IVH8 894 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 LRRC71Q8N4P6 559 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 TMEM161BQ8NDZ6 487 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 FAM212AQ96EL1 285 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 PCYT2Q99447 389 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 TMEM106CQ9BVX2 250 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 CCDC94Q9BW85 323 aaPredicted RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 NFKBIZQ9BYH8 718 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 KCTD10Q9H3F6 313 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 R3HDMLQ9H3Y0 253 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 DEF6Q9H4E7 631 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 PCIF1Q9H4Z3 704 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 BCAS3Q9H6U6 928 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 GPRC5CQ9NQ84 441 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 RTN4Q9NQC3 1192 aaKnown RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 STARD7Q9NQZ5 370 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 AGPAT3Q9NRZ7 376 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 TOPORSQ9NS56 1045 aaPredicted RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 HSPBP1Q9NZL4 362 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 FLRT1Q9NZU1 646 aa6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 AGO2Q9UKV8 859 aaKnown RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 TRIP12Q14669 1992 aaPredicted RBP6.36□□□□□ -1.39
RNU1-88P-201ENST00000459274 CITO14578 2027 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 ITIH6Q6UXX5 1313 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 A0A0U1RQG5 324 aaPredicted RBP6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 A0A1B0GTH6 734 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 LGALS16A8MUM7 142 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 ACKR2O00590 384 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 GPR182O15218 404 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 P4HA2O15460 535 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZSCAN12O43309 604 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 EXTL3O43909 919 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 IL18RAPO95256 599 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 C22orf31O95567 290 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 F2P00734 622 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 INHAP05111 366 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 HARSP12081 509 aaKnown RBP6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 SKIP12755 728 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 HOXD8P13378 290 aaPredicted RBP6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZNF18P17022 549 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 ATP4AP20648 1035 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 RFX1P22670 979 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 GLRA2P23416 452 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 CST5P28325 142 aaPredicted RBP6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 CLCN3P51790 818 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 MARSP56192 900 aaKnown RBP6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 ENPEPQ07075 957 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 BFSP1Q12934 665 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 BIRC3Q13489 604 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms