RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 Q4G0T1 1027 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 MSL1Q68DK7 614 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 TTBK2Q6IQ55 1244 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 GJB7Q6PEY0 223 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 JAMLQ86YT9 394 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 CTNNBL1Q8WYA6 563 aaPredicted RBP9.17□□□□□ -0.94
VPS50-208ENST00000458707 N4BP2L2Q92802 583 aaPredicted RBP9.17□□□□□ -0.94
VPS50-208ENST00000458707 MKNK1Q9BUB5 465 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 ANO3Q9BYT9 981 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 GPR88Q9GZN0 384 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 ZHX3Q9H4I2 956 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 NOD2Q9HC29 1040 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 SRP68Q9UHB9 627 aaKnown RBP9.17□□□□□ -0.94
VPS50-208ENST00000458707 RASAL2Q9UJF2 1139 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 DNM3Q9UQ16 869 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 PCDHA3Q9Y5H8 950 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 ANKRD62A6NC57 917 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 MIF4GDA9UHW6 222 aaKnown RBP9.17□□□□□ -0.94
VPS50-208ENST00000458707 PODXLO00592 558 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 RGS16O15492 202 aaPredicted RBP9.17□□□□□ -0.94
VPS50-208ENST00000458707 TGFB1I1O43294 461 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 OAS1P00973 400 aaKnown RBP9.17□□□□□ -0.94
VPS50-208ENST00000458707 ALAS1P13196 640 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 SCP2P22307 547 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 CTNNA2P26232 953 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 CHRNA3P32297 505 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 RBM5P52756 815 aaKnown RBP eCLIP9.17□□□□□ -0.94
VPS50-208ENST00000458707 GRIK3Q13003 919 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 AP3B2Q13367 1082 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 CRYMQ14894 314 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 ZRSR2Q15696 482 aaKnown RBP9.17□□□□□ -0.94
VPS50-208ENST00000458707 TCERG1LQ5VWI1 586 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 MFSD5Q6N075 450 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 C11orf63Q6NUN7 778 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 DPP8Q6V1X1 898 aaPredicted RBP9.17□□□□□ -0.94
VPS50-208ENST00000458707 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 SLC51AQ86UW1 340 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 CEP57Q86XR8 500 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 GLYCTKQ8IVS8 523 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 CCDC24Q8N4L8 307 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 FBXO25Q8TCJ0 367 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 ALG3Q92685 438 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 SCLT1Q96NL6 688 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 TRIM31Q9BZY9 425 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 EBF2Q9HAK2 575 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 PARP2Q9UGN5 583 aa9.17□□□□□ -0.94
VPS50-208ENST00000458707 PFASO15067 1338 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 SPATA31A5Q5VU36 1347 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 SPATA31A7Q8IWB4 1347 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 USP17L15C9J2P7 530 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 USP17L13C9JLJ4 530 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 USP17L11C9JVI0 530 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 USP17L18D6R9N7 530 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 USP17L22D6RA61 530 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 USP17L17D6RBQ6 530 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 USP17L19D6RCP7 530 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 USP17L20D6RJB6 530 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 GGPS1O95749 300 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 ALADP13716 330 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 GAP43P17677 238 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 PSMC2P35998 433 aaKnown RBP9.16□□□□□ -0.94
VPS50-208ENST00000458707 FMO5P49326 533 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 PPARDQ03181 441 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 USP17L24Q0WX57 530 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 PABPC4Q13310 644 aaKnown RBP eCLIP9.16□□□□□ -0.94
VPS50-208ENST00000458707 SLC29A2Q14542 456 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 ZNF268Q14587 947 aaPredicted RBP9.16□□□□□ -0.94
VPS50-208ENST00000458707 KIF22Q14807 665 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 DRAP1Q14919 205 aaPredicted RBP9.16□□□□□ -0.94
VPS50-208ENST00000458707 ZNF568Q3ZCX4 644 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 HIBCHQ6NVY1 386 aaPredicted RBP9.16□□□□□ -0.94
VPS50-208ENST00000458707 USP17L6PQ6QN14 398 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 TRPM8Q7Z2W7 1104 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 CLEC10AQ8IUN9 316 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 RHOT2Q8IXI1 618 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 LRRC34Q8IZ02 419 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 CCDC63Q8NA47 563 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 CCHCR1Q8TD31 782 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 GLG1Q92896 1179 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 LENG9Q96B70 501 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 ARHGEF26Q96DR7 871 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 SH3GL3Q99963 347 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 POLR3CQ9BUI4 534 aaPredicted RBP9.16□□□□□ -0.94
VPS50-208ENST00000458707 NSRP1Q9H0G5 558 aaKnown RBP9.16□□□□□ -0.94
VPS50-208ENST00000458707 STMN4Q9H169 189 aaPredicted RBP9.16□□□□□ -0.94
VPS50-208ENST00000458707 AZI2Q9H6S1 392 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 INTS9Q9NV88 658 aaKnown RBP9.16□□□□□ -0.94
VPS50-208ENST00000458707 HCSTQ9UBK5 93 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 DNAJC12Q9UKB3 198 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 SLX4Q8IY92 1834 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 WDR81Q562E7 1941 aa9.16□□□□□ -0.94
VPS50-208ENST00000458707 UBE4BO95155 1302 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 RSPH10B2B2RC85 870 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 STK25O00506 426 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 MEIS2O14770 477 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 ATP2C2O75185 946 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 EYA4O95677 639 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 RSPH10BP0C881 870 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 SETSIPP0DME0 302 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 RARGP13631 454 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms