RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SAMD15Q9P1V8 674 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 GTF2IRD1Q9UHL9 959 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 FBXO2Q9UK22 296 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 ADAM30Q9UKF2 790 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 SOX13Q9UN79 622 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 IPPQ9Y573 584 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 CLRN2A0PK11 232 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 ERICH2A1L162 156 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 PRAMEF27A3QJZ7 478 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 ZNF891A8MT65 544 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 TCP10L2B9ZVM9 353 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 H7C1D1 291 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 K7ESF4 209 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 NMT2O60551 498 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 SIN3BO75182 1162 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 PPM1BO75688 479 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 HLA-DOAP06340 250 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 ASGR2P07307 311 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 CPB1P15086 417 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 SELPP16109 830 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 TYRP1P17643 537 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 ADCYAP1R1P41586 468 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 YARSP54577 528 aaKnown RBP5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 CCT2P78371 535 aaKnown RBP5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 SCRN1Q12765 414 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 WTAPQ15007 396 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 TBC1D10BQ4KMP7 808 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 CCDC178Q5BJE1 867 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 RCSD1Q6JBY9 416 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 APOA5Q6Q788 366 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 NFXL1Q6ZNB6 911 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 MAMDC2Q7Z304 686 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 CATIPQ7Z7H3 387 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 SYT9Q86SS6 491 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 FAM83AQ86UY5 434 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 PPFIBP1Q86W92 1011 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 IQCA1Q86XH1 822 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 MYLK4Q86YV6 388 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 DRC7Q8IY82 874 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 CCDC144CPQ8IYA2 1237 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 CRACR2BQ8N4Y2 399 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 CCDC155Q8N6L0 562 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 FAM13CQ8NE31 585 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 NEDD1Q8NHV4 660 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 KCTD13Q8WZ19 329 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 GTPBP3Q969Y2 492 aaKnown RBP5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 MPP4Q96JB8 637 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 NUP88Q99567 741 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 LLPHQ9BRT6 129 aaKnown RBP5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 UBAC1Q9BSL1 405 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 ADAM19Q9H013 955 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 NMRK2Q9NPI5 230 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 IL17RBQ9NRM6 502 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 TCP11L1Q9NUJ3 509 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 MKS1Q9NXB0 559 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 GPRC5DQ9NZD1 345 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 TMOD2Q9NZR1 351 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 PI4KBQ9UBF8 816 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 SERPINB13Q9UIV8 391 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 NAP1L2Q9ULW6 460 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 SMC3Q9UQE7 1217 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 ZKSCAN5Q9Y2L8 839 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 SIPA1L1O43166 1804 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 CNTNAP1P78357 1384 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 ATRNL1Q5VV63 1379 aa5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 COL2A1P02458 1487 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P4-201ENST00000455362 ABHD14A-ACY1A0A1B0GW23 586 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 CCDC69A6NI79 296 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 TSPY2A6NKD2 308 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 SPDYE3A6NKU9 549 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 GOLGA8BA8MQT2 603 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 ZBTB43O43298 467 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 TBX1O43435 398 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 MYO1BO43795 1136 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 DHX16O60231 1041 aaKnown RBP5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 DLX3O60479 287 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 DTNBO60941 627 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 DDNO94850 711 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 CTDNEP1O95476 244 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 TSPY3P0CV98 308 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 TSPY8P0CW00 308 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 SLURP2P0DP57 97 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 GRK4P32298 578 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 SHMT1P34896 483 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 COPB2P35606 906 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 EPS15P42566 896 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 CCT5P48643 541 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 NOVP48745 357 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 RENBPP51606 427 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 ERVK-21P61565 698 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 ETF1P62495 437 aaKnown RBP5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 OCRLQ01968 901 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 ZNF468Q5VIY5 522 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 FAM117BQ6P1L5 589 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 TATDN1Q6P1N9 297 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 XRRA1Q6P2D8 792 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 POMZP3Q6PJE2 187 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 SYNE3Q6ZMZ3 975 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 RAB11FIP4Q86YS3 637 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms