RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 TTLL6Q8N841 843 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 SYTL5Q8TDW5 730 aaPredicted RBP13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 ARHGEF26Q96DR7 871 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 HOOK2Q96ED9 719 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 FBXL18Q96ME1 805 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 AGBL1Q96MI9 1066 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 DDX47Q9H0S4 455 aaKnown RBP13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 C17orf75Q9HAS0 396 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 OSGEPQ9NPF4 335 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 HSPBP1Q9NZL4 362 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 EXOC7Q9UPT5 735 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 UTP11Q9Y3A2 253 aaKnown RBP13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 EBAG9O00559 213 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 C21orf2O43822 256 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 ITGA4P13612 1032 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 DNA2P51530 1060 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 PSMC5P62195 406 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 GPC5P78333 572 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 KRT76Q01546 638 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 PPP3CAQ08209 521 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 CYP1B1Q16678 543 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 HAUS6Q7Z4H7 955 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 MAP4K3Q8IVH8 894 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 IL31RAQ8NI17 732 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 BCAS4Q8TDM0 211 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 ATP8B4Q8TF62 1192 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 SPIRE2Q8WWL2 714 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 SHC3Q92529 594 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 RNPC3Q96LT9 517 aaKnown RBP13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 RUNDC3BQ96NL0 473 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 NTPCRQ9BSD7 190 aaKnown RBP13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 AP1M1Q9BXS5 423 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 TMEM39BQ9GZU3 492 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 THAP2Q9H0W7 228 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 EPN3Q9H201 632 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 ZNF219Q9P2Y4 722 aaPredicted RBP13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 PCYOX1Q9UHG3 505 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 NOCTQ9UK39 431 aaKnown RBP13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 COG5Q9UP83 839 aa13.53□□□□□ -0.24
ECHDC1-209ENST00000454591 LOC285556D6RIA3 1793 aa13.52□□□□□ -0.24
ECHDC1-209ENST00000454591 DOCK1Q14185 1865 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 A0A087WUV0 522 aaPredicted RBP13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 GOLGA6L10A0A0M3HER8 536 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 NFIBO00712 420 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 SOCS7O14512 581 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 FGGP02679 453 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 CYP1A2P05177 515 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 PAEPP09466 180 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 ALAS1P13196 640 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 CTNNA2P26232 953 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 ABCD1P33897 745 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 MDH1P40925 334 aaKnown RBP13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 GPC3P51654 580 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 RTP1P59025 263 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 RNASE9P60153 205 aaKnown RBP13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 SPP2Q13103 211 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 HLTFQ14527 1009 aaKnown RBP eCLIP13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 SMYD5Q6GMV2 418 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 B4GALNT4Q76KP1 1039 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 YTHDF3Q7Z739 585 aaKnown RBP13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 DNAAF5Q86Y56 855 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 ARHGEF19Q8IW93 802 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 PLEKHO2Q8TD55 490 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 EPS8L1Q8TE68 723 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 CD101Q93033 1021 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 FAM81BQ96LP2 452 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 GLIS2Q9BZE0 524 aaPredicted RBP13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 WNT8AQ9H1J5 351 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 NEUROG2Q9H2A3 272 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 UBE2TQ9NPD8 197 aaPredicted RBP13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 TAS2R14Q9NYV8 317 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 AMACRQ9UHK6 382 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 ZNRF3Q9ULT6 936 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 RLFQ13129 1914 aa13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 ZNFX1Q9P2E3 1918 aaKnown RBP13.52□□□□□ -0.25
ECHDC1-209ENST00000454591 GOLGA6L10A6NI86 522 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 WDR64B1ANS9 1081 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 MAFGO15525 162 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 TTI1O43156 1089 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 NUDT17P0C025 328 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 MYZAPP0CAP1 466 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 CHRNB2P17787 502 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 SCP2P22307 547 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 YWHABP31946 246 aaKnown RBP13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 CHRNA3P32297 505 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 LSP1P33241 339 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 MXI1P50539 228 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 PEX5P50542 639 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 DLG4P78352 724 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 ZNF844Q08AG5 666 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 MTMR1Q13613 665 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 PGM5Q15124 567 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 PTGISQ16647 500 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 ARHGAP44Q17R89 818 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 CEP85LQ5SZL2 805 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 ZNF746Q6NUN9 644 aaPredicted RBP13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 PALB2Q86YC2 1186 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 LARGE2Q8N3Y3 721 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 UBL4BQ8N7F7 174 aa13.51□□□□□ -0.25
ECHDC1-209ENST00000454591 MFSD14AQ96MC6 490 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms