RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 BLIDQ8IZY5 108 aa19.99■□□□□ 0.79
PTPA-223ENST00000452489 SERPINB12Q96P63 405 aa19.99■□□□□ 0.79
PTPA-223ENST00000452489 ZSCAN10Q96SZ4 725 aaPredicted RBP19.99■□□□□ 0.79
PTPA-223ENST00000452489 METTL14Q9HCE5 456 aaKnown RBP19.99■□□□□ 0.79
PTPA-223ENST00000452489 NKIRAS1Q9NYS0 192 aa19.99■□□□□ 0.79
PTPA-223ENST00000452489 CLIC5Q9NZA1 410 aa19.99■□□□□ 0.79
PTPA-223ENST00000452489 STX18Q9P2W9 335 aaKnown RBP19.99■□□□□ 0.79
PTPA-223ENST00000452489 STARD13Q9Y3M8 1113 aa19.99■□□□□ 0.79
PTPA-223ENST00000452489 COL4A3BPQ9Y5P4 624 aa19.99■□□□□ 0.79
PTPA-223ENST00000452489 RIC1Q4ADV7 1423 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 RNASEH1O60930 286 aaKnown RBP19.98■□□□□ 0.79
PTPA-223ENST00000452489 GRIA2P42262 883 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 STRN3Q13033 797 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 BTG3Q14201 252 aaPredicted RBP19.98■□□□□ 0.79
PTPA-223ENST00000452489 ZCWPW2Q504Y3 356 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 CYB5RLQ6IPT4 315 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 IZUMO2Q6UXV1 221 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 SYCE1Q8N0S2 351 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 MTA3Q9BTC8 594 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 ERFP50548 548 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 WDR4P57081 412 aaKnown RBP19.98■□□□□ 0.79
PTPA-223ENST00000452489 TTC27Q6P3X3 843 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 RFX8Q6ZV50 586 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 GUF1Q8N442 669 aaKnown RBP19.98■□□□□ 0.79
PTPA-223ENST00000452489 WDR66Q8TBY9 1149 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 MAGEF1Q9HAY2 307 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 PAIP2BQ9ULR5 123 aaKnown RBP19.98■□□□□ 0.79
PTPA-223ENST00000452489 PCDHA3Q9Y5H8 950 aa19.98■□□□□ 0.79
PTPA-223ENST00000452489 TJP1Q07157 1748 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 MYMKA6NI61 221 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 EXOC3O60645 756 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 CFAP157Q5JU67 520 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 MFSD4BQ5TF39 518 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 NELFCDQ8IXH7 590 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 MIGA1Q8NAN2 632 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 SMYD1Q8NB12 490 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 STMN2Q93045 179 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 NACAP1Q9BZK3 213 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 TCP11L1Q9NUJ3 509 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 TRAF5O00463 557 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 H2AFZP0C0S5 128 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 PABPC4LP0CB38 370 aaKnown RBP19.97■□□□□ 0.79
PTPA-223ENST00000452489 CETPP11597 493 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 GJA8P48165 433 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 DAB2IPQ5VWQ8 1189 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 H2AFVQ71UI9 128 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 ZNF554Q86TJ5 538 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 SATL1Q86VE3 508 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 OLFM3Q96PB7 478 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 RNF41Q9H4P4 317 aaPredicted RBP19.97■□□□□ 0.79
PTPA-223ENST00000452489 SYNCQ9H7C4 482 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 DNAJC17Q9NVM6 304 aaKnown RBP19.97■□□□□ 0.79
PTPA-223ENST00000452489 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.97■□□□□ 0.79
PTPA-223ENST00000452489 TMOD4Q9NZQ9 345 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 ZFP69BQ9UJL9 534 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 BARX2Q9UMQ3 279 aaPredicted RBP19.97■□□□□ 0.79
PTPA-223ENST00000452489 WDR37Q9Y2I8 494 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 PTPN22Q9Y2R2 807 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 UMODL1Q5DID0 1318 aa19.97■□□□□ 0.79
PTPA-223ENST00000452489 RAD21O60216 631 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 VARSP26640 1264 aaKnown RBP19.96■□□□□ 0.79
PTPA-223ENST00000452489 C10orf82Q8WW14 230 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 PRDM16Q9HAZ2 1276 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 PCDH18Q9HCL0 1135 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 ARHGEF38Q9NXL2 777 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 CYP11B2P19099 503 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 ATP5DP30049 168 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 GALK1P51570 392 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 AMPD3Q01432 767 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 PFKFB3Q16875 520 aaPredicted RBP19.96■□□□□ 0.79
PTPA-223ENST00000452489 NCCRP1Q6ZVX7 275 aaPredicted RBP19.96■□□□□ 0.79
PTPA-223ENST00000452489 TTC5Q8N0Z6 440 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 CFAP61Q8NHU2 1237 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 ALG3Q92685 438 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 ZNF653Q96CK0 615 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 RUNDC3BQ96NL0 473 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 ZNF212Q9UDV6 495 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 SH3GLB1Q9Y371 365 aa19.96■□□□□ 0.79
PTPA-223ENST00000452489 CCDC194A0A1B0GVG4 234 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 SULT2A1Q06520 285 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 MTDHQ86UE4 582 aaKnown RBP19.95■□□□□ 0.78
PTPA-223ENST00000452489 ZDHHC14Q8IZN3 488 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 ST13P4Q8IZP2 240 aaPredicted RBP19.95■□□□□ 0.78
PTPA-223ENST00000452489 HAUS1Q96CS2 278 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 CCDC28BQ9BUN5 200 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 INIPQ9NRY2 104 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 GSC2O15499 205 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 IL9RQ01113 521 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 THOC5Q13769 683 aaKnown RBP19.95■□□□□ 0.78
PTPA-223ENST00000452489 R3HDM1Q15032 1099 aaKnown RBP19.95■□□□□ 0.78
PTPA-223ENST00000452489 CTC1Q2NKJ3 1217 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 ZNF568Q3ZCX4 644 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 CCDC125Q86Z20 511 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 SCUBE1Q8IWY4 988 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 PRELID2Q8N945 189 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 RBM46Q8TBY0 533 aaKnown RBP19.95■□□□□ 0.78
PTPA-223ENST00000452489 TSG101Q99816 390 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 CORO1BQ9BR76 489 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 PARP2Q9UGN5 583 aa19.95■□□□□ 0.78
PTPA-223ENST00000452489 BCORQ6W2J9 1755 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms