RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 AXDND1Q5T1B0 1012 aaPredicted RBP22.04■■□□□ 1.12
COL9A3-202ENST00000452372 RRAGBQ5VZM2 374 aa22.04■■□□□ 1.12
COL9A3-202ENST00000452372 LARP4BQ92615 738 aaKnown RBP22.04■■□□□ 1.12
COL9A3-202ENST00000452372 DRC1Q96MC2 740 aa22.04■■□□□ 1.12
COL9A3-202ENST00000452372 C2orf40Q9H1Z8 148 aa22.04■■□□□ 1.12
COL9A3-202ENST00000452372 C17orf75Q9HAS0 396 aa22.04■■□□□ 1.12
COL9A3-202ENST00000452372 TMEM161AQ9NX61 479 aa22.04■■□□□ 1.12
COL9A3-202ENST00000452372 STK17AQ9UEE5 414 aa22.04■■□□□ 1.12
COL9A3-202ENST00000452372 RALGAPA2Q2PPJ7 1873 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 ERLIN2O94905 339 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 AXLP30530 894 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 KRT85P78386 507 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 NCBP1Q09161 790 aaKnown RBP22.03■■□□□ 1.12
COL9A3-202ENST00000452372 MAPK7Q13164 816 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 GPM6BQ13491 265 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 MCM6Q14566 821 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 AMHR2Q16671 573 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 TWF2Q6IBS0 349 aaKnown RBP22.03■■□□□ 1.12
COL9A3-202ENST00000452372 ECHDC2Q86YB7 292 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 ZBTB8OSQ8IWT0 167 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 FZD8Q9H461 694 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 UBE2ZQ9H832 354 aaPredicted RBP22.03■■□□□ 1.12
COL9A3-202ENST00000452372 PCDHA7Q9UN72 937 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 TCHHQ07283 1943 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 MYH11P35749 1972 aa22.03■■□□□ 1.12
COL9A3-202ENST00000452372 ATG2AQ2TAZ0 1938 aa22.02■■□□□ 1.12
COL9A3-202ENST00000452372 TSPAN1O60635 241 aa22.02■■□□□ 1.12
COL9A3-202ENST00000452372 EOMESO95936 686 aa22.02■■□□□ 1.12
COL9A3-202ENST00000452372 IBSPP21815 317 aaPredicted RBP22.02■■□□□ 1.12
COL9A3-202ENST00000452372 ME1P48163 572 aa22.02■■□□□ 1.12
COL9A3-202ENST00000452372 RAD51AP2Q09MP3 1159 aa22.02■■□□□ 1.12
COL9A3-202ENST00000452372 DHX8Q14562 1220 aaKnown RBP22.02■■□□□ 1.12
COL9A3-202ENST00000452372 NAALADL2Q58DX5 795 aa22.02■■□□□ 1.12
COL9A3-202ENST00000452372 CCDC73Q6ZRK6 1079 aa22.02■■□□□ 1.12
COL9A3-202ENST00000452372 GPBP1Q86WP2 473 aa22.02■■□□□ 1.12
COL9A3-202ENST00000452372 DEPTORQ8TB45 409 aa22.02■■□□□ 1.12
COL9A3-202ENST00000452372 PRIMPOLQ96LW4 560 aa22.02■■□□□ 1.12
COL9A3-202ENST00000452372 PANK2Q9BZ23 570 aa22.02■■□□□ 1.12
COL9A3-202ENST00000452372 PRMT7Q9NVM4 692 aaPredicted RBP22.02■■□□□ 1.12
COL9A3-202ENST00000452372 KCNG1Q9UIX4 513 aa22.02■■□□□ 1.12
COL9A3-202ENST00000452372 SFI1A8K8P3 1242 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 C5orf67F2Z3F1 127 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 ZNF623O75123 536 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 SKIP12755 728 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 BMPR1AP36894 532 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 PEX3P56589 373 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 FAM187BQ17R55 369 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 SHC4Q6S5L8 630 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 PPP4R3CPQ6ZMV5 832 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 ZNF598Q86UK7 904 aaKnown RBP22.01■■□□□ 1.11
COL9A3-202ENST00000452372 FIBCD1Q8N539 461 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.01■■□□□ 1.11
COL9A3-202ENST00000452372 CLP1Q92989 425 aaKnown RBP22.01■■□□□ 1.11
COL9A3-202ENST00000452372 CHAMP1Q96JM3 812 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 NTPCRQ9BSD7 190 aaKnown RBP22.01■■□□□ 1.11
COL9A3-202ENST00000452372 FAM105AQ9NUU6 356 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 ODF2LQ9ULJ1 636 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 ADGRA3Q8IWK6 1321 aa22.01■■□□□ 1.11
COL9A3-202ENST00000452372 NPHP3-ACAD11A0A0J9YXS1 232 aa22■■□□□ 1.11
COL9A3-202ENST00000452372 NCLP19338 710 aaKnown RBP22■■□□□ 1.11
COL9A3-202ENST00000452372 NPTX2P47972 431 aa22■■□□□ 1.11
COL9A3-202ENST00000452372 RAB27AP51159 221 aa22■■□□□ 1.11
COL9A3-202ENST00000452372 EFNA5P52803 228 aa22■■□□□ 1.11
COL9A3-202ENST00000452372 DMP1Q13316 513 aaPredicted RBP22■■□□□ 1.11
COL9A3-202ENST00000452372 BTG3Q14201 252 aaPredicted RBP22■■□□□ 1.11
COL9A3-202ENST00000452372 COL19A1Q14993 1142 aa22■■□□□ 1.11
COL9A3-202ENST00000452372 NOTUMQ6P988 496 aa22■■□□□ 1.11
COL9A3-202ENST00000452372 CMTR2Q8IYT2 770 aaKnown RBP22■■□□□ 1.11
COL9A3-202ENST00000452372 LEO1Q8WVC0 666 aaPredicted RBP22■■□□□ 1.11
COL9A3-202ENST00000452372 CCDC51Q96ER9 411 aa22■■□□□ 1.11
COL9A3-202ENST00000452372 CCDC113Q9H0I3 377 aa22■■□□□ 1.11
COL9A3-202ENST00000452372 CD320Q9NPF0 282 aa22■■□□□ 1.11
COL9A3-202ENST00000452372 FNDC1Q4ZHG4 1894 aaPredicted RBP21.99■■□□□ 1.11
COL9A3-202ENST00000452372 A0A087X0B3 334 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 CCDC169A6NNP5 214 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 HOXA2O43364 376 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 PLS3P13797 630 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 ATF7P17544 494 aaPredicted RBP21.99■■□□□ 1.11
COL9A3-202ENST00000452372 ARF4P18085 180 aaPredicted RBP21.99■■□□□ 1.11
COL9A3-202ENST00000452372 ANP32AP39687 249 aaKnown RBP21.99■■□□□ 1.11
COL9A3-202ENST00000452372 STAT6P42226 847 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 MAPK6Q16659 721 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 LEXMQ3ZCV2 418 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 UBXN11Q5T124 520 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 SV2BQ7L1I2 683 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 PDILTQ8N807 584 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 SPIRE2Q8WWL2 714 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 CPB2Q96IY4 423 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 SPATA32Q96LK8 384 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 REEP2Q9BRK0 252 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 KIFC3Q9BVG8 833 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 SCAND2PQ9GZW5 306 aaPredicted RBP21.99■■□□□ 1.11
COL9A3-202ENST00000452372 KMT5AQ9NQR1 393 aa21.99■■□□□ 1.11
COL9A3-202ENST00000452372 RBM19Q9Y4C8 960 aaKnown RBP21.99■■□□□ 1.11
COL9A3-202ENST00000452372 A0A1B0GUA9 196 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 ACKR2O00590 384 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 GRM6O15303 877 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 B4GALT5O43286 388 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 RB1P06400 928 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 FGFR1P11362 822 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms