RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 ZC3H4Q9UPT8 1303 aaKnown RBP13.08□□□□□ -0.31
COL27A1-202ENST00000451716 IGSF9BQ9UPX0 1349 aa13.08□□□□□ -0.31
COL27A1-202ENST00000451716 WDR64B1ANS9 1081 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 SYF2O95926 243 aaKnown RBP13.08□□□□□ -0.32
COL27A1-202ENST00000451716 RPS12P25398 132 aaKnown RBP13.08□□□□□ -0.32
COL27A1-202ENST00000451716 GGCXP38435 758 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 VAMP7P51809 220 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 PSMC5P62195 406 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 C10orf76Q5T2E6 689 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 TSHZ1Q6ZSZ6 1077 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 SCYL3Q8IZE3 742 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 TRPM4Q8TD43 1214 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 IFT81Q8WYA0 676 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 KAT5Q92993 513 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 FAM84AQ96KN4 292 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 NENFQ9UMX5 172 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 ANKRD63C9JTQ0 380 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 CEP104O60308 925 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 KIF4AO95239 1232 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 MAGEA9P43362 315 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 C1orf220Q5T0J3 134 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 DAAM2Q86T65 1068 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 SLC9A9Q8IVB4 645 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 C4orf19Q8IY42 314 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 SLC20A1Q8WUM9 679 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 TAF4BQ92750 862 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 CCDC127Q96BQ5 260 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 POP1Q99575 1024 aaKnown RBP13.08□□□□□ -0.32
COL27A1-202ENST00000451716 AP1M1Q9BXS5 423 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 TMEM206Q9H813 350 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 ACP6Q9NPH0 428 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 GABBR1Q9UBS5 961 aa13.08□□□□□ -0.32
COL27A1-202ENST00000451716 CHORDC1Q9UHD1 332 aaPredicted RBP13.08□□□□□ -0.32
COL27A1-202ENST00000451716 RGS20O76081 388 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 ADRB2P07550 413 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 USP8P40818 1118 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 CARSP49589 748 aaKnown RBP13.07□□□□□ -0.32
COL27A1-202ENST00000451716 GUCY2DQ02846 1103 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 TMEM132BQ14DG7 1078 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 CBWD2Q8IUF1 395 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 XXYLT1Q8NBI6 393 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 SLC30A5Q8TAD4 765 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 BSNDQ8WZ55 320 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 CCDC97Q96F63 343 aaPredicted RBP13.07□□□□□ -0.32
COL27A1-202ENST00000451716 SLC24A3Q9HC58 644 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 ZNF862O60290 1169 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 RNF40O75150 1001 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 HEXIM1O94992 359 aaKnown RBP13.07□□□□□ -0.32
COL27A1-202ENST00000451716 ADSSP30520 456 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 PEX26Q7Z412 305 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 NLRX1Q86UT6 975 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 VSIG10LQ86VR7 867 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 EPB41L5Q9HCM4 733 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 USP20Q9Y2K6 914 aa13.07□□□□□ -0.32
COL27A1-202ENST00000451716 BTNL10A8MVZ5 291 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 AGPSO00116 658 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 NPTX2P47972 431 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 GTF2BQ00403 316 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 ZNF746Q6NUN9 644 aaPredicted RBP13.06□□□□□ -0.32
COL27A1-202ENST00000451716 INTS8Q75QN2 995 aaKnown RBP13.06□□□□□ -0.32
COL27A1-202ENST00000451716 METTL13Q8N6R0 699 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 SLC35G2Q8TBE7 412 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 ARHGEF26Q96DR7 871 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 CEP89Q96ST8 783 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 ZNF214Q9UL59 606 aaPredicted RBP13.06□□□□□ -0.32
COL27A1-202ENST00000451716 NFU1Q9UMS0 254 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 LYPLA2O95372 231 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 KRT76Q01546 638 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 DCAF15Q66K64 600 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 SWSAP1Q6NVH7 229 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 TSEN2Q8NCE0 465 aaKnown RBP13.06□□□□□ -0.32
COL27A1-202ENST00000451716 REPS2Q8NFH8 660 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 FAM71BQ8TC56 605 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 CEP170P1Q96L14 293 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 MOV10L1Q9BXT6 1211 aaKnown RBP13.06□□□□□ -0.32
COL27A1-202ENST00000451716 THAP2Q9H0W7 228 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 ACBD3Q9H3P7 528 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 FAM204AQ9H8W3 233 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 VIPAS39Q9H9C1 493 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 TOPORSQ9NS56 1045 aaPredicted RBP13.06□□□□□ -0.32
COL27A1-202ENST00000451716 DENND3A2RUS2 1198 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 FZD9O00144 591 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 BUB1BO60566 1050 aaPredicted RBP13.06□□□□□ -0.32
COL27A1-202ENST00000451716 FAM153BP0C7A2 387 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 TNFAIP3P21580 790 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 CCND2P30279 289 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 JAK3P52333 1124 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 FAM153CQ494X1 144 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 MSL3Q8N5Y2 521 aaKnown RBP13.06□□□□□ -0.32
COL27A1-202ENST00000451716 SYT11Q9BT88 431 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 TMEM117Q9H0C3 514 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 KDM4CQ9H3R0 1056 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 RNF14Q9UBS8 474 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 FAM153AQ9UHL3 310 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 PCDHA10Q9Y5I2 948 aa13.06□□□□□ -0.32
COL27A1-202ENST00000451716 CENPFP49454 3210 aa13.05□□□□□ -0.32
COL27A1-202ENST00000451716 RAD51CO43502 376 aa13.05□□□□□ -0.32
COL27A1-202ENST00000451716 NEBLO76041 1014 aa13.05□□□□□ -0.32
COL27A1-202ENST00000451716 TMEM161BQ8NDZ6 487 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms