RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 NACC1Q96RE7 527 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 TRIM6Q9C030 488 aaPredicted RBP10.74□□□□□ -0.69
USP54-207ENST00000451492 TLE6Q9H808 572 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 RSAD1Q9HA92 442 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 TBC1D13Q9NVG8 400 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 SPG21Q9NZD8 308 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 DNAJB4Q9UDY4 337 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 KIAA1024Q9UPX6 916 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.74□□□□□ -0.69
USP54-207ENST00000451492 CUL9Q8IWT3 2517 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 E9PMD0 336 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 OFD1O75665 1012 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 GLP2RO95838 553 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 ITGA4P13612 1032 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 ARF4P18085 180 aaPredicted RBP10.73□□□□□ -0.69
USP54-207ENST00000451492 HOXA11P31270 313 aaPredicted RBP10.73□□□□□ -0.69
USP54-207ENST00000451492 PPM1AP35813 382 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 LTBRP36941 435 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 MLH1P40692 756 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 ALDH7A1P49419 539 aaKnown RBP10.73□□□□□ -0.69
USP54-207ENST00000451492 MCM2P49736 904 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 AFF1P51825 1210 aaKnown RBP10.73□□□□□ -0.69
USP54-207ENST00000451492 KRT17Q04695 432 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 UBE3AQ05086 875 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 LARP1BQ659C4 914 aaKnown RBP10.73□□□□□ -0.69
USP54-207ENST00000451492 AGMOQ6ZNB7 445 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 FAM43BQ6ZT52 329 aaPredicted RBP10.73□□□□□ -0.69
USP54-207ENST00000451492 TMEM173Q86WV6 379 aaPredicted RBP10.73□□□□□ -0.69
USP54-207ENST00000451492 ZBTB8OSQ8IWT0 167 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 SLC39A11Q8N1S5 342 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 MCPH1Q8NEM0 835 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 AUTS2Q8WXX7 1259 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 BSNDQ8WZ55 320 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 TMEM169Q96HH4 297 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 FAM193BQ96PV7 902 aaPredicted RBP10.73□□□□□ -0.69
USP54-207ENST00000451492 PLIN2Q99541 437 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 KIFC3Q9BVG8 833 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 APOL5Q9BWW9 433 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 RAB34Q9BZG1 259 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 BHMT2Q9H2M3 363 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 NXF3Q9H4D5 531 aaKnown RBP10.73□□□□□ -0.69
USP54-207ENST00000451492 NRDE2Q9H7Z3 1164 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.73□□□□□ -0.69
USP54-207ENST00000451492 PUF60Q9UHX1 559 aaKnown RBP10.73□□□□□ -0.69
USP54-207ENST00000451492 DBR1Q9UK59 544 aaKnown RBP10.73□□□□□ -0.69
USP54-207ENST00000451492 USP20Q9Y2K6 914 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 IPPQ9Y573 584 aa10.73□□□□□ -0.69
USP54-207ENST00000451492 VWA3AA6NCI4 1184 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 GRXCR2A6NFK2 248 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 HIDE1A8MVS5 230 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 B4GALT3O60512 393 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 SSBP05455 408 aaKnown RBP eCLIP10.72□□□□□ -0.69
USP54-207ENST00000451492 AKAP5P24588 427 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 SLC11A1P49279 550 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 SCNN1GP51170 649 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 NCBP1Q09161 790 aaKnown RBP10.72□□□□□ -0.69
USP54-207ENST00000451492 RAD51AP2Q09MP3 1159 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 ADAM15Q13444 863 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 IL17AQ16552 155 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 AMHR2Q16671 573 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 RILPL1Q5EBL4 403 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 KRT79Q5XKE5 535 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 DTHD1Q6ZMT9 781 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 ZNF280BQ86YH2 543 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 SMG8Q8ND04 991 aaKnown RBP10.72□□□□□ -0.69
USP54-207ENST00000451492 DEPTORQ8TB45 409 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 BCL7CQ8WUZ0 217 aaPredicted RBP10.72□□□□□ -0.69
USP54-207ENST00000451492 KHSRPQ92945 711 aaKnown RBP eCLIP10.72□□□□□ -0.69
USP54-207ENST00000451492 ZFP42Q96MM3 310 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 TRAIPQ9BWF2 469 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 CSRNP2Q9H175 543 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 RNF39Q9H2S5 420 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 CD320Q9NPF0 282 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 KLK14Q9P0G3 267 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 CD207Q9UJ71 328 aa10.72□□□□□ -0.69
USP54-207ENST00000451492 PRG3Q9Y2Y8 225 aaPredicted RBP10.72□□□□□ -0.69
USP54-207ENST00000451492 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.71□□□□□ -0.69
USP54-207ENST00000451492 TTLL13PA6NNM8 815 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 FSCN2O14926 492 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 MBTPS2O43462 519 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 NCK2O43639 380 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 DDHD2O94830 711 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 PRKCBP05771 671 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 XRCC6P12956 609 aaKnown RBP eCLIP10.71□□□□□ -0.69
USP54-207ENST00000451492 NCLP19338 710 aaKnown RBP10.71□□□□□ -0.69
USP54-207ENST00000451492 AXLP30530 894 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 OR1G1P47890 313 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 PLCB3Q01970 1234 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 SMC1AQ14683 1233 aaKnown RBP10.71□□□□□ -0.69
USP54-207ENST00000451492 DUSP6Q16828 381 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 CTC1Q2NKJ3 1217 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 C2orf16Q68DN1 1984 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 SLC27A1Q6PCB7 646 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 FAM178BQ8IXR5 827 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 EFHBQ8N7U6 833 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 IGSF22Q8N9C0 903 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 VN1R2Q8NFZ6 395 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 GAD1Q99259 594 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 BACH2Q9BYV9 841 aa10.71□□□□□ -0.69
USP54-207ENST00000451492 PRMT7Q9NVM4 692 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms