RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 VAMP7P51809 220 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 FCGRTP55899 365 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 CDCA2Q69YH5 1023 aaPredicted RBP15.55■□□□□ 0.08
USP39-207ENST00000450066 DPY19L2P1Q6NXN4 242 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 LRRC71Q8N4P6 559 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 C16orf45Q96MC5 204 aaPredicted RBP15.55■□□□□ 0.08
USP39-207ENST00000450066 CHP1Q99653 195 aa15.55■□□□□ 0.08
USP39-207ENST00000450066 SUCLA2Q9P2R7 463 aaPredicted RBP15.55■□□□□ 0.08
USP39-207ENST00000450066 SIP14410 1827 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 MAGEB2O15479 319 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 CCDC175P0C221 793 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 TRIM49P0CI25 452 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 TRIM49CP0CI26 452 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 SLC9A1P19634 815 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 PTPN14Q15678 1187 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 EFCAB12Q6NXP0 572 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 RRAGAQ7L523 313 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 REXO1L1PQ8IX06 675 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 ZSWIM2Q8NEG5 633 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 GANQ9H2C0 597 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 GCNT4Q9P109 453 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 FBXL5Q9UKA1 691 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 ADGRG1Q9Y653 693 aa15.54■□□□□ 0.08
USP39-207ENST00000450066 GOLGA6L9A6NEM1 432 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 LRRC53A6NM62 1247 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 KIAA0391O15091 583 aaKnown RBP15.53■□□□□ 0.08
USP39-207ENST00000450066 ASAP2O43150 1006 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 DYNC1LI2O43237 492 aaPredicted RBP15.53■□□□□ 0.08
USP39-207ENST00000450066 POLR2FP61218 127 aaKnown RBP15.53■□□□□ 0.08
USP39-207ENST00000450066 DEFB115Q30KQ5 88 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 KLHDC7AQ5VTJ3 777 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 SLFN12LQ6IEE8 588 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 PDXDC1Q6P996 788 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 CBWD2Q8IUF1 395 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 SYN2Q92777 582 aaPredicted RBP15.53■□□□□ 0.08
USP39-207ENST00000450066 SAAL1Q96ER3 474 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 DESI2Q9BSY9 194 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 C2orf40Q9H1Z8 148 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 Q9Y3F1 56 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 GOLGA8IPA6NC78 632 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 GOLGA8JA6NMD2 632 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 SRGAP2CP0DJJ0 459 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 KLRC1P26715 233 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 PSMC4P43686 418 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 LACTBP83111 547 aaPredicted RBP15.53■□□□□ 0.08
USP39-207ENST00000450066 ENPEPQ07075 957 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 TFDP1Q14186 410 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 HSP90AA2PQ14568 343 aaPredicted RBP15.53■□□□□ 0.08
USP39-207ENST00000450066 CBWD6Q4V339 395 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 CBWD3Q5JTY5 395 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 CBWD5Q5RIA9 395 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 TLK2Q86UE8 772 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 CCDC170Q8IYT3 715 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 GPD1LQ8N335 351 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 METTL13Q8N6R0 699 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 CAPNS2Q96L46 248 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 MFSD14AQ96MC6 490 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 CCDC113Q9H0I3 377 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 KIAA1586Q9HCI6 787 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 CREBZFQ9NS37 354 aa15.53■□□□□ 0.08
USP39-207ENST00000450066 PCNTO95613 3336 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 KIF2AO00139 706 aaPredicted RBP15.52■□□□□ 0.08
USP39-207ENST00000450066 P4HA2O15460 535 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 AOC2O75106 756 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 N4BP1O75113 896 aaKnown RBP15.52■□□□□ 0.08
USP39-207ENST00000450066 ADRB2P07550 413 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 ACTN1P12814 892 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 TNNT1P13805 278 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 UCHL3P15374 230 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 IGBP1P78318 339 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 DLG4P78352 724 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 APBA1Q02410 837 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 ZPBP2Q6X784 338 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 RHPN2Q8IUC4 686 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 ZBTB8OSQ8IWT0 167 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 LINC01465Q8N7H1 131 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 RNF149Q8NC42 400 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 NLRC4Q9NPP4 1024 aa15.52■□□□□ 0.08
USP39-207ENST00000450066 EPN1Q9Y6I3 576 aaPredicted RBP15.52■□□□□ 0.08
USP39-207ENST00000450066 MGAMO43451 1857 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 PMM2O15305 246 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 EXTL3O43909 919 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 MSCO60682 206 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 NDUFA10O95299 355 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 TUBB4AP04350 444 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 CLCN3P51790 818 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 MYL7Q01449 175 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 C1orf220Q5T0J3 134 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 TRIM65Q6PJ69 517 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 USP37Q86T82 979 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 PLEKHO2Q8TD55 490 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 TMC2Q8TDI7 906 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 ARHGAP39Q9C0H5 1083 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 NHEJ1Q9H9Q4 299 aaPredicted RBP15.52■□□□□ 0.07
USP39-207ENST00000450066 SIX2Q9NPC8 291 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 MYO6Q9UM54 1294 aa15.52■□□□□ 0.07
USP39-207ENST00000450066 POU5F1BQ06416 359 aa15.51■□□□□ 0.07
USP39-207ENST00000450066 PPP3CAQ08209 521 aa15.51■□□□□ 0.07
USP39-207ENST00000450066 CETN1Q12798 172 aa15.51■□□□□ 0.07
USP39-207ENST00000450066 PPFIA1Q13136 1202 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms