RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 PER1O15534 1290 aaPredicted RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 CYP2C9P11712 490 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 VAMP7P51809 220 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 CUL1Q13616 776 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 SLC39A14Q15043 492 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 SCG3Q8WXD2 468 aaKnown RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 TEX12Q9BXU0 123 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 CPA4Q9UI42 421 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 ZCCHC11Q5TAX3 1644 aaKnown RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 POLRMTO00411 1230 aaKnown RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 SLCO1A2P46721 670 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 ATG16L1Q676U5 607 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 EIF2AK1Q9BQI3 630 aaKnown RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 CAPN10Q9HC96 672 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 BAIAP2L1Q9UHR4 511 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 PRG3Q9Y2Y8 225 aaPredicted RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 CCDC38Q502W7 563 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 GIPC2Q8TF65 315 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 CCDC138Q96M89 665 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 AGAP1Q9UPQ3 857 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 PQBP1O60828 265 aaKnown RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 HSPA4LO95757 839 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 PPP3CCP48454 512 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 CYP4A22Q5TCH4 519 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 PRR5LQ6MZQ0 368 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 C11orf96Q7Z7L8 435 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 STRBPQ96SI9 672 aaKnown RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 EPAS1Q99814 870 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 Q9H521 79 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 DCP1AQ9NPI6 582 aaPredicted RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 CNOT8Q9UFF9 292 aaKnown RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 JRKLQ9Y4A0 524 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 PRR36Q9H6K5 1346 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 CDC42EP1Q00587 391 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 ZKSCAN8Q15776 578 aaPredicted RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 FOPNLQ96NB1 174 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 GBA2Q9HCG7 927 aaPredicted RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 C6orf203Q9P0P8 240 aaPredicted RBP13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 MTMR6Q9Y217 621 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 TRIM17Q9Y577 477 aa13.56□□□□□ -0.24
AC006001.3-201ENST00000449307 SPDYE5A6NIY4 337 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 TBXAS1P24557 533 aaPredicted RBP13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 SPDYE7PQ495Y7 208 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 HS6ST3Q8IZP7 471 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 GPD1LQ8N335 351 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 MAN1C1Q9NR34 630 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 CALB1P05937 261 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 DUOXA2Q1HG44 320 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 SH2D3AQ9BRG2 576 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 C11orf70Q9BRQ4 267 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 AP1M1Q9BXS5 423 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 SNX9Q9Y5X1 595 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 SSH2Q76I76 1423 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 H7C1W4 665 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 C2orf54Q08AI8 447 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 NSUN7Q8NE18 718 aaKnown RBP13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 PAGE5Q96GU1 130 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 EXOC1LA0A1B0GW35 172 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 NR3C1P04150 777 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 DNAJB2P25686 324 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 HEATR6Q6AI08 1181 aaKnown RBP13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 PPP4R3CPQ6ZMV5 832 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 OOSP2Q86WS3 158 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 MAML1Q92585 1016 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 CRAMP1Q96RY5 1269 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 TMEM39AQ9NV64 488 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 RAG1P15918 1043 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 LIG3P49916 1009 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 CENPUQ71F23 418 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 ZKSCAN4Q969J2 545 aaPredicted RBP13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 HAUS4Q9H6D7 363 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 STARD7Q9NQZ5 370 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 SYNMO15061 1565 aa13.55□□□□□ -0.24
AC006001.3-201ENST00000449307 SPTLC1O15269 473 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 SLC25A27O95847 323 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 EIF4A3P38919 411 aaKnown RBP13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 TPI1P60174 286 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 GNGT1P63211 74 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 TMEM132DQ14C87 1099 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 ANKRD20A4Q4UJ75 823 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 ANKRD20A8PQ5CZ79 823 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 ANKRD20A2Q5SQ80 823 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 ANKRD20A1Q5TYW2 823 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 PHLDB3Q6NSJ2 640 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 EHD2Q9NZN4 543 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 KPNA1P52294 538 aaPredicted RBP13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 KCNB1Q14721 858 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 FAM20AQ96MK3 541 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 UNC45AQ9H3U1 944 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 DNAJC5Q9H3Z4 198 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 ADARB2Q9NS39 739 aaKnown RBP13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 RGL1Q9NZL6 768 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 RWDD2AQ9UIY3 292 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 ZNF197O14709 1029 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 HIP1RO75146 1068 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 TMEM132BQ14DG7 1078 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 MID2Q9UJV3 735 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 A6NNZ2 444 aa13.54□□□□□ -0.24
AC006001.3-201ENST00000449307 ARIH2O95376 493 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms