RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	C11orf63	Q6NUN7	778 aa		18.31	■□□□□ 0.52
TOM1-210	ENST00000449058	LPAR1	Q92633	364 aa		18.31	■□□□□ 0.52
TOM1-210	ENST00000449058	NAP1L3	Q99457	506 aa	Predicted RBP	18.31	■□□□□ 0.52
TOM1-210	ENST00000449058	CELF4	Q9BZC1	486 aa	Known RBP	18.31	■□□□□ 0.52
TOM1-210	ENST00000449058	FAM114A2	Q9NRY5	505 aa		18.31	■□□□□ 0.52
TOM1-210	ENST00000449058	SAMM50	Q9Y512	469 aa		18.31	■□□□□ 0.52
TOM1-210	ENST00000449058	PFAS	O15067	1338 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	ZEB2	O60315	1214 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	FLT3	P36888	993 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	NCKAP1L	P55160	1127 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	C4orf19	Q8IY42	314 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	SAMD3	Q8N6K7	520 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	ZSWIM2	Q8NEG5	633 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	SLC38A10	Q9HBR0	1119 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	BCS1L	Q9Y276	419 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	FTL	P02792	175 aa	Predicted RBP	18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	ALAS1	P13196	640 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	MTMR3	Q13615	1198 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	CLUL1	Q15846	466 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	UGCG	Q16739	394 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	TMC3	Q7Z5M5	1100 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	ALG3	Q92685	438 aa		18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	UTP11	Q9Y3A2	253 aa	Known RBP	18.3	■□□□□ 0.52
TOM1-210	ENST00000449058	EBAG9	O00559	213 aa		18.29	■□□□□ 0.52
TOM1-210	ENST00000449058	MAGEA9	P43362	315 aa		18.29	■□□□□ 0.52
TOM1-210	ENST00000449058	ZNF844	Q08AG5	666 aa		18.29	■□□□□ 0.52
TOM1-210	ENST00000449058	IWS1	Q96ST2	819 aa		18.29	■□□□□ 0.52
TOM1-210	ENST00000449058	KIAA1683	Q9H0B3	1180 aa		18.29	■□□□□ 0.52
TOM1-210	ENST00000449058	TMEM117	Q9H0C3	514 aa		18.29	■□□□□ 0.52
TOM1-210	ENST00000449058	VPS33B	Q9H267	617 aa		18.29	■□□□□ 0.52
TOM1-210	ENST00000449058	ZNRF3	Q9ULT6	936 aa		18.29	■□□□□ 0.52
TOM1-210	ENST00000449058	ALG6	Q9Y672	507 aa		18.29	■□□□□ 0.52
TOM1-210	ENST00000449058	TMEM150B	A6NC51	233 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	WNT10B	O00744	389 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	BACH1	O14867	736 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	VCAM1	P19320	739 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	CTNNA1	P35221	906 aa	Known RBP	18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	PGM5	Q15124	567 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	NBPF9	Q3BBW0	867 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	FAM71A	Q8IYT1	594 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	RPUSD2	Q8IZ73	545 aa	Known RBP	18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	CPXCR1	Q8N123	301 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	ATP8B4	Q8TF62	1192 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	TAAR1	Q96RJ0	339 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	RAVER2	Q9HCJ3	691 aa	Known RBP	18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	NOCT	Q9UK39	431 aa	Known RBP	18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	WDR81	Q562E7	1941 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	GOLGA6L10	A6NI86	522 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	MIF4GD	A9UHW6	222 aa	Known RBP	18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	SLC16A4	O15374	487 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	RTN2	O75298	545 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	ADRB2	P07550	413 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	MYZAP	P0CAP1	466 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	LSP1	P33241	339 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	MXI1	P50539	228 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	GPC5	P78333	572 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	SKIDA1	Q1XH10	827 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	NAA35	Q5VZE5	725 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	SLC17A8	Q8NDX2	589 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	FAM107B	Q9H098	131 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	RAB17	Q9H0T7	212 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	GPRC5C	Q9NQ84	441 aa		18.28	■□□□□ 0.52
TOM1-210	ENST00000449058	GOLGA6L10	A0A0M3HER8	536 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	MTA2	O94776	668 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	CHRNB2	P17787	502 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	EIF2AK2	P19525	551 aa	Known RBP	18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	PEX3	P56589	373 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	PSMC5	P62195	406 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	GUCY1A3	Q02108	690 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	PRPF4B	Q13523	1007 aa	Known RBP	18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	OR2W6P	Q8NHA6	318 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	EPS8L1	Q8TE68	723 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	KAT5	Q92993	513 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	PCDHB18P	Q96TA0	734 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	SH2D3A	Q9BRG2	576 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	TRIM51	Q9BSJ1	452 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	RABEP2	Q9H5N1	569 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	ERVK-5	Q9HDB9	667 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	CTTNBP2NL	Q9P2B4	639 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	PARP14	Q460N5	1801 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	MYO1F	O00160	1098 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	CCNE2	O96020	404 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	RXRB	P28702	533 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	MDH1	P40925	334 aa	Known RBP	18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	JAK3	P52333	1124 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	RPS6	P62753	249 aa	Known RBP	18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	DR1	Q01658	176 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	ZNF211	Q13398	564 aa	Predicted RBP	18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	DUPD1	Q68J44	220 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	KREMEN1	Q96MU8	473 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	TXLNGY	Q9BZA5	131 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	DPH5	Q9H2P9	285 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	ANKEF1	Q9NU02	776 aa		18.27	■□□□□ 0.52
TOM1-210	ENST00000449058	FAM170A	A1A519	330 aa		18.26	■□□□□ 0.51
TOM1-210	ENST00000449058	FAM187A	A6NFU0	413 aa		18.26	■□□□□ 0.51
TOM1-210	ENST00000449058	SRRM3	A6NNA2	597 aa	Predicted RBP	18.26	■□□□□ 0.51
TOM1-210	ENST00000449058	ANKRD65	E5RJM6	399 aa		18.26	■□□□□ 0.51
TOM1-210	ENST00000449058	ATP9A	O75110	1047 aa		18.26	■□□□□ 0.51
TOM1-210	ENST00000449058	SGPL1	O95470	568 aa		18.26	■□□□□ 0.51
TOM1-210	ENST00000449058	GZMA	P12544	262 aa		18.26	■□□□□ 0.51

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