RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 PPME1Q9Y570 386 aa15.33■□□□□ 0.04
PDLIM2-213ENST00000448520 CSDE1O75534 798 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 PBX3P40426 434 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 QARSP47897 775 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 RAB27AP51159 221 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 POLGP54098 1239 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 CEBPZQ03701 1054 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 DNM1Q05193 864 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 TTC38Q5R3I4 469 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 LLGL2Q6P1M3 1020 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 GLB1LQ6UWU2 654 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 RHPN2Q8IUC4 686 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 FBXL6Q8N531 539 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 PGBD4Q96DM1 585 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 USP28Q96RU2 1077 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 ADAM7Q9H2U9 754 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 ZSCAN16Q9H4T2 348 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 STK39Q9UEW8 545 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 HCFC2Q9Y5Z7 792 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 IRAK3Q9Y616 596 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 CLIC4Q9Y696 253 aa15.32■□□□□ 0.04
PDLIM2-213ENST00000448520 SLC37A4O43826 429 aa15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 CLASP2O75122 1294 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 P4HBP07237 508 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 PDIA4P13667 645 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 GCFC2P16383 781 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 MCM7P33993 719 aa15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 PTPN5P54829 565 aa15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 PPP2R5CQ13362 524 aa15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 PTPN21Q16825 1174 aa15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 NOMO2Q5JPE7 1267 aa15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 PPP4R3AQ6IN85 833 aa15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 ANO5Q75V66 913 aa15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 CATSPER4Q7RTX7 472 aa15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 DDX53Q86TM3 631 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 VPS52Q8N1B4 723 aa15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 NAP1L4Q99733 375 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 CYP26B1Q9NR63 512 aa15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 FAM105AQ9NUU6 356 aa15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 NOL7Q9UMY1 257 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 PIN4Q9Y237 131 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-213ENST00000448520 TMEM150BA6NC51 233 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 NT5C1B-RDH14C9J2C7 533 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 TBX3O15119 743 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 ASAP2O43150 1006 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 CCNT1O60563 726 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 OFD1O75665 1012 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 GALTP07902 379 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 CTSAP10619 480 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 MTHFRP42898 656 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 RNASELQ05823 741 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 WDFY4Q6ZS81 3184 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 SRGAP1Q7Z6B7 1085 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 SLC7A3Q8WY07 619 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 IGSF21Q96ID5 467 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 RIPOR3Q96MK2 946 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 SH2D3AQ9BRG2 576 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 IRF2BPLQ9H1B7 796 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 TMEM60Q9H2L4 133 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 NRDE2Q9H7Z3 1164 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 KANSL3Q9P2N6 904 aa15.3■□□□□ 0.04
PDLIM2-213ENST00000448520 EML1O00423 815 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 GAS2O43903 313 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 ZC3H11AO75152 810 aaKnown RBP eCLIP15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 NCLP19338 710 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 CA8P35219 290 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 EPHA7Q15375 998 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 SF3A1Q15459 793 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 RILPL1Q5EBL4 403 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 ATAT1Q5SQI0 421 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 OTUD6AQ7L8S5 288 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 ZBTB33Q86T24 672 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 PPFIBP1Q86W92 1011 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 POTEDQ86YR6 584 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 C4orf19Q8IY42 314 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 UBALD2Q8IYN6 164 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 ASIC4Q96FT7 647 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 CEP170P1Q96L14 293 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 NLRP4Q96MN2 994 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 APOL5Q9BWW9 433 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 ZBP1Q9H171 429 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 DHX33Q9H6R0 707 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 IFT122Q9HBG6 1241 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 GDPD2Q9HCC8 539 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 KCNMB3Q9NPA1 279 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 TBC1D13Q9NVG8 400 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 DZANK1Q9NVP4 752 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 COL4A3BPQ9Y5P4 624 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 CACNA1HO95180 2353 aa15.29■□□□□ 0.04
PDLIM2-213ENST00000448520 MARCH6O60337 910 aa15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 ALDH2P05091 517 aa15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 RFC5P40937 340 aa15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 TRAPPC10P48553 1259 aa15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 NUBP1P53384 320 aa15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 PCBP1Q15365 356 aaKnown RBP eCLIP15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 IER5LQ5T953 404 aa15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 MRPL10Q7Z7H8 261 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 KSR1Q8IVT5 923 aa15.28■□□□□ 0.04
PDLIM2-213ENST00000448520 PLCD3Q8N3E9 789 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms