RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 LLGL1Q15334 1064 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 KYNUQ16719 465 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 TRMT5Q32P41 509 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 NLRP9Q7RTR0 991 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 SEC14L1Q92503 715 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 ZNF287Q9HBT7 754 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 PPARGC1AQ9UBK2 798 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 A2ML1A8K2U0 1454 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 EYA4O95677 639 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 NR3C1P04150 777 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 PON1P27169 355 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 TTC1Q99614 292 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 ASCC2Q9H1I8 757 aaPredicted RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 DNM3Q9UQ16 869 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 DCTN2Q13561 401 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 RFX8Q6ZV50 586 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 KIF1BO60333 1816 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 E2F6O75461 281 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 FAM13AO94988 1023 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 EEF2P13639 858 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 GALCP54803 685 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 ADARP55265 1226 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 CAVIN4Q5BKX8 364 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 MPHOSPH6Q99547 160 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 SMYD3Q9H7B4 428 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 RMI1Q9H9A7 625 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 PCYOX1Q9UHG3 505 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 HECW2Q9P2P5 1572 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 SUPT3HO75486 399 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 ZNF444Q8N0Y2 327 aaPredicted RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 SH3TC2Q8TF17 1288 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 MCM9Q9NXL9 1143 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 SH3GLB1Q9Y371 365 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 PDIA5Q14554 519 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 CCNJLQ8IV13 435 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 RASGEF1CQ8N431 466 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 FBXO25Q8TCJ0 367 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 GDPD5Q8WTR4 605 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 B2RBV5 119 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 NBPF26B4DH59 902 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 STRNO43815 780 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 ESRRAP11474 423 aaPredicted RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 VAV1P15498 845 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 LTKP29376 864 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 GFM2Q969S9 779 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 UIMC1Q96RL1 719 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 TRIM55Q9BYV6 548 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 WNT8AQ9H1J5 351 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 STARD13Q9Y3M8 1113 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 C4orf50Q6ZRC1 276 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 SNF8Q96H20 258 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 MPP4Q96JB8 637 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 MTFR1LQ9H019 292 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 DDX25Q9UHL0 483 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 CDC42BPBQ9Y5S2 1711 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 PLA2G4BP0C869 781 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 ADCY7P51828 1080 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 MAP3K21Q5TCX8 1036 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 PIP4K2CQ8TBX8 421 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 LARP4BQ92615 738 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 CDH16O75309 829 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 NR2F2P24468 414 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 TRIM28Q13263 835 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 RRP1BQ14684 758 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 STAT4Q14765 748 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 PPP4R3CPQ6ZMV5 832 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 GLYCTKQ8IVS8 523 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 NMD3Q96D46 503 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 FNBP1Q96RU3 617 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 BTBD10Q9BSF8 475 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 TRAIPQ9BWF2 469 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 GREM2Q9H772 168 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 RPL5P46777 297 aaKnown RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 ASPHQ12797 758 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 CCDC125Q86Z20 511 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 LBHD1Q9BQE6 289 aaPredicted RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 TOM1O60784 492 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 TCEA3O75764 348 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 SUPT20HQ8NEM7 779 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 ART4Q93070 314 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 NAP1L4Q99733 375 aaKnown RBP5.35□□□□□ -1.55
HERC1-201ENST00000443617 DHX36Q9H2U1 1008 aaKnown RBP5.35□□□□□ -1.55
HERC1-201ENST00000443617 TCRBV5S4A2TA0A5A2 114 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 RAD21O60216 631 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 CHN2P52757 468 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 PNPLA7Q6ZV29 1317 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 PLCB3Q01970 1234 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 CTTNQ14247 550 aaKnown RBP5.35□□□□□ -1.55
HERC1-201ENST00000443617 DRAP1Q14919 205 aaPredicted RBP5.35□□□□□ -1.55
HERC1-201ENST00000443617 RNF207Q6ZRF8 634 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 PPP2R3CQ969Q6 453 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 HAUS8Q9BT25 410 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 TCHPQ9BT92 498 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 KCNMB3Q9NPA1 279 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 SERPINA10Q9UK55 444 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 ABCC6O95255 1503 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 PEX11AO75192 247 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 BPIFB4P59827 614 aa5.35□□□□□ -1.55
HERC1-201ENST00000443617 CCDC137Q6PK04 289 aaKnown RBP5.35□□□□□ -1.55
HERC1-201ENST00000443617 ATL2Q8NHH9 583 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms