RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 C7orf25Q9BPX7 421 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 FGFBP2Q9BYJ0 223 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 PBX4Q9BYU1 374 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 BLZF1Q9H2G9 400 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 MAGEF1Q9HAY2 307 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 PARVGQ9HBI0 331 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 CHST12Q9NRB3 414 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 PRMT7Q9NVM4 692 aaPredicted RBP17.67■□□□□ 0.42
USP39-205ENST00000442708 LARSQ9P2J5 1176 aaKnown RBP17.67■□□□□ 0.42
USP39-205ENST00000442708 YBX2Q9Y2T7 364 aaKnown RBP17.67■□□□□ 0.42
USP39-205ENST00000442708 FRMD3A2A2Y4 597 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 K7ERI5 159 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 ARHGEF15O94989 841 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 ZNF202O95125 648 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 GJB5O95377 273 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 MAPTP10636 758 aaKnown RBP17.66■□□□□ 0.42
USP39-205ENST00000442708 IDEP14735 1019 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 ZSCAN20P17040 1043 aaPredicted RBP17.66■□□□□ 0.42
USP39-205ENST00000442708 ATF7P17544 494 aaPredicted RBP17.66■□□□□ 0.42
USP39-205ENST00000442708 NMT1P30419 496 aaKnown RBP17.66■□□□□ 0.42
USP39-205ENST00000442708 EFNA5P52803 228 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 SMAD3P84022 425 aaKnown RBP17.66■□□□□ 0.42
USP39-205ENST00000442708 SNW1Q13573 536 aaKnown RBP17.66■□□□□ 0.42
USP39-205ENST00000442708 CUL4BQ13620 913 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 ECHDC2Q86YB7 292 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 CEP57L1Q8IYX8 460 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 PYM1Q9BRP8 204 aaKnown RBP17.66■□□□□ 0.42
USP39-205ENST00000442708 EIF2AQ9BY44 585 aaKnown RBP17.66■□□□□ 0.42
USP39-205ENST00000442708 TMEM134Q9H6X4 195 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 C1orf112Q9NSG2 853 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 FNDC1Q4ZHG4 1894 aaPredicted RBP17.66■□□□□ 0.42
USP39-205ENST00000442708 PHLPP2Q6ZVD8 1323 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 CNTNAP2Q9UHC6 1331 aa17.66■□□□□ 0.42
USP39-205ENST00000442708 A0A0U1RQF3 1178 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 LCHNA4D1U4 455 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 GOLGA6L4A6NEF3 574 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 ACKR2O00590 384 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 TRAK2O60296 914 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 PRR29P0C7W0 189 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 AXLP30530 894 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 GATMP50440 423 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 PCBP1Q15365 356 aaKnown RBP eCLIP17.65■□□□□ 0.42
USP39-205ENST00000442708 MAPK6Q16659 721 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 EEF1DP3Q658K8 133 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 TWF2Q6IBS0 349 aaKnown RBP17.65■□□□□ 0.42
USP39-205ENST00000442708 KRBA2Q6ZNG9 492 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 FAM43BQ6ZT52 329 aaPredicted RBP17.65■□□□□ 0.42
USP39-205ENST00000442708 HAUS6Q7Z4H7 955 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 ZNF598Q86UK7 904 aaKnown RBP17.65■□□□□ 0.42
USP39-205ENST00000442708 NPAS4Q8IUM7 802 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 HPS3Q969F9 1004 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 TRAIPQ9BWF2 469 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 PDZD7Q9H5P4 517 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 RNF19AQ9NV58 838 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 PANK4Q9NVE7 773 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 TBC1D7Q9P0N9 293 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 USP25Q9UHP3 1055 aa17.65■□□□□ 0.42
USP39-205ENST00000442708 A0A1B0GUA9 196 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 MEIS3P2A8K0S8 358 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 K7ENM7 598 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 NR1I2O75469 434 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 CASP5P51878 434 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 SMTNP53814 917 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 ASIC1P78348 528 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 HTRA4P83105 476 aaPredicted RBP17.64■□□□□ 0.41
USP39-205ENST00000442708 AMPD3Q01432 767 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 COASYQ13057 564 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 PRPF4BQ13523 1007 aaKnown RBP17.64■□□□□ 0.41
USP39-205ENST00000442708 CSPP1Q1MSJ5 1256 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 ZC2HC1CQ53FD0 456 aaPredicted RBP17.64■□□□□ 0.41
USP39-205ENST00000442708 NOTUMQ6P988 496 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 FAM178BQ8IXR5 827 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 GLIS3Q8NEA6 775 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 PRIMPOLQ96LW4 560 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 STRA6Q9BX79 667 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 LRRC27Q9C0I9 530 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 IKZF4Q9H2S9 585 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 RC3H2Q9HBD1 1191 aaKnown RBP17.64■□□□□ 0.41
USP39-205ENST00000442708 FAM105AQ9NUU6 356 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 DACT1Q9NYF0 836 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 PCDHA11Q9Y5I1 949 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 CHD7Q9P2D1 2997 aa17.64■□□□□ 0.41
USP39-205ENST00000442708 TLL1O43897 1013 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 KLRC4O43908 158 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 PRPF40AO75400 957 aaKnown RBP17.63■□□□□ 0.41
USP39-205ENST00000442708 DGKIO75912 1065 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 FGFR1P11362 822 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 GAP43P17677 238 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 DNAJB2P25686 324 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 FAM160A1Q05DH4 1040 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 EHHADHQ08426 723 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 HERC4Q5GLZ8 1057 aaPredicted RBP17.63■□□□□ 0.41
USP39-205ENST00000442708 ZNF720Q7Z2F6 126 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 SPRED2Q7Z698 418 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 SMG8Q8ND04 991 aaKnown RBP17.63■□□□□ 0.41
USP39-205ENST00000442708 KCNN1Q92952 543 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 LPPQ93052 612 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 ZNF689Q96CS4 500 aaPredicted RBP17.63■□□□□ 0.41
USP39-205ENST00000442708 RAD9AQ99638 391 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 ACO2Q99798 780 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms