RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 RRP12Q5JTH9 1297 aaKnown RBP7.22□□□□□ -1.25
HDAC6-210ENST00000441703 ICE2Q659A1 982 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 SARM1Q6SZW1 724 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 CYP26C1Q6V0L0 522 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 RBM43Q6ZSC3 357 aaKnown RBP7.22□□□□□ -1.25
HDAC6-210ENST00000441703 STOX1Q6ZVD7 989 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 GET4Q7L5D6 327 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-210ENST00000441703 FILIP1Q7Z7B0 1213 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 SAMD3Q8N6K7 520 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 GOLGA6L1Q8N7Z2 621 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 IL31RAQ8NI17 732 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 FEZF2Q8TBJ5 459 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 C16orf45Q96MC5 204 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-210ENST00000441703 CASD1Q96PB1 797 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 NCAPGQ9BPX3 1015 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 CPVLQ9H3G5 476 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 BCAS3Q9H6U6 928 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 ELAC1Q9H777 363 aaKnown RBP7.22□□□□□ -1.25
HDAC6-210ENST00000441703 PIDD1Q9HB75 910 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 ZNF446Q9NWS9 450 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 DPP7Q9UHL4 492 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 RSPH14Q9UHP6 348 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 MRPS17Q9Y2R5 130 aaKnown RBP7.22□□□□□ -1.25
HDAC6-210ENST00000441703 MTF2Q9Y483 593 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-210ENST00000441703 NUMBLQ9Y6R0 609 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 ZMYM6O95789 1325 aa7.22□□□□□ -1.25
HDAC6-210ENST00000441703 BAZ2BQ9UIF8 2168 aaKnown RBP7.22□□□□□ -1.25
HDAC6-210ENST00000441703 CCDC195A0A1B0GUA6 201 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 CARNS1A5YM72 827 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 INPPL1O15357 1258 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 FIBPO43427 364 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 STX6O43752 255 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 PNMA6AP0CW24 399 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 PCP11498 1178 aaKnown RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 CD72P21854 359 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 TCF7P36402 384 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 POLGP54098 1239 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 BCAR1P56945 870 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 GPC5P78333 572 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 PLCB2Q00722 1185 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 TYRO3Q06418 890 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 HTR4Q13639 388 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 ALX1Q15699 326 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 ASPRV1Q53RT3 343 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 STPG1Q5TH74 334 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 TSHZ3Q63HK5 1081 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 LRRC55Q6ZSA7 311 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 CEP68Q76N32 757 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 PDZD3Q86UT5 571 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 LRRC8AQ8IWT6 810 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 DRC7Q8IY82 874 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 ADGRF4Q8IZF3 695 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 NME8Q8N427 588 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 RNF169Q8NCN4 708 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 CMASQ8NFW8 434 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 FBXO18Q8NFZ0 1043 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 CACTINQ8WUQ7 758 aaKnown RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 SMG7Q92540 1137 aaKnown RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 MAP4K1Q92918 833 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 PHKBQ93100 1093 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 MRFAP1L1Q96HT8 127 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 MYCBPQ99417 103 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 NELL2Q99435 816 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 DDX23Q9BUQ8 820 aaKnown RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 SRRTQ9BXP5 876 aaKnown RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 MRPL9Q9BYD2 267 aaKnown RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 CBX8Q9HC52 389 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 GDPD2Q9HCC8 539 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 MAN1C1Q9NR34 630 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 FAM217BQ9NTX9 383 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 ARGLU1Q9NWB6 273 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.21□□□□□ -1.26
HDAC6-210ENST00000441703 IRAK3Q9Y616 596 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 FRMPD4Q14CM0 1322 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 KDM3AQ9Y4C1 1321 aa7.21□□□□□ -1.26
HDAC6-210ENST00000441703 GCN1Q92616 2671 aaKnown RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 DOCK8Q8NF50 2099 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 MYO1CO00159 1063 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 TM4SF5O14894 197 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 STAM2O75886 525 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 LAMP2P13473 410 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 INSRRP14616 1297 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 TARSP26639 723 aaKnown RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 HOXA13P31271 388 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 RPS9P46781 194 aaKnown RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 NT5C2P49902 561 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 CCR3P51677 355 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 CLCN4P51793 760 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 PDE1AP54750 535 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 LRMPQ12912 555 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 MTAPQ13126 283 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 SF3A2Q15428 464 aaKnown RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 ELF2Q15723 593 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 MARCH8Q5T0T0 291 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 VPS53Q5VIR6 699 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 C19orf48Q6RUI8 117 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 ZNF852Q6ZMS4 543 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 TPRG1Q6ZUI0 275 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 FCHSD1Q86WN1 690 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 DGKHQ86XP1 1220 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms