RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 PPP2R5EQ16537 467 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 TYW1BQ6NUM6 668 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 C11orf88Q6PI97 169 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 BRICD5Q6PL45 260 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 LRSAM1Q6UWE0 723 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 MAMDC2Q7Z304 686 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-206ENST00000441438 OSBP2Q969R2 916 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 NGLY1Q96IV0 654 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 TEKT2Q9UIF3 430 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 MAP3K19Q56UN5 1328 aa11.4□□□□□ -0.59
SYNE2-206ENST00000441438 FSCN2O14926 492 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 DAB1O75553 588 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 ZKSCAN1P17029 563 aaPredicted RBP11.39□□□□□ -0.59
SYNE2-206ENST00000441438 HNRNPH2P55795 449 aaKnown RBP11.39□□□□□ -0.59
SYNE2-206ENST00000441438 MYL6P60660 151 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 CUL2Q13617 745 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 SEPT6Q14141 434 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 CCDC38Q502W7 563 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 COG1Q8WTW3 980 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 CASP10Q92851 521 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 KIF12Q96FN5 646 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 PRDM5Q9NQX1 630 aaPredicted RBP11.39□□□□□ -0.59
SYNE2-206ENST00000441438 PRKAG3Q9UGI9 489 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 DISP2A7MBM2 1401 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 HDAC3O15379 428 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 YKT6O15498 198 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 POLR3DP05423 398 aaPredicted RBP11.39□□□□□ -0.59
SYNE2-206ENST00000441438 IFNAR2P48551 515 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 ADALQ6DHV7 355 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 INTS10Q9NVR2 710 aaKnown RBP11.39□□□□□ -0.59
SYNE2-206ENST00000441438 TUBGCP4Q9UGJ1 667 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 CLEC4AQ9UMR7 237 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 MYO3BQ8WXR4 1341 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 CAPN14A8MX76 684 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 E2F3O00716 465 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 EXTL3O43909 919 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 ENDOD1O94919 500 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 DDX58O95786 925 aaKnown RBP11.39□□□□□ -0.59
SYNE2-206ENST00000441438 ACTN2P35609 894 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 RARSP54136 660 aaKnown RBP11.39□□□□□ -0.59
SYNE2-206ENST00000441438 RASGRF1Q13972 1273 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 GPR158Q5T848 1215 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 SLC30A6Q6NXT4 461 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 RGS9BPQ6ZS82 235 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 CEP97Q8IW35 865 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 NUP93Q8N1F7 819 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 MAELQ96JY0 434 aaKnown RBP11.39□□□□□ -0.59
SYNE2-206ENST00000441438 STMN4Q9H169 189 aaPredicted RBP11.39□□□□□ -0.59
SYNE2-206ENST00000441438 TRPC5Q9UL62 973 aaPredicted RBP11.39□□□□□ -0.59
SYNE2-206ENST00000441438 PARP3Q9Y6F1 533 aa11.39□□□□□ -0.59
SYNE2-206ENST00000441438 ARHGAP10A1A4S6 786 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 CTAGE9A4FU28 777 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 MICAL2O94851 1124 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 HMOX1P09601 288 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 RHOXF2BP0C7M4 288 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 PDHBP11177 359 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 PDGFRAP16234 1089 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 GAP43P17677 238 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 ATP4AP20648 1035 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 TARSP26639 723 aaKnown RBP11.38□□□□□ -0.59
SYNE2-206ENST00000441438 GBP2P32456 591 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-206ENST00000441438 PSMD7P51665 324 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 PPFIA1Q13136 1202 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 GNA13Q14344 377 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 RAB3GAP1Q15042 981 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 RPS26P11Q5JNZ5 115 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-206ENST00000441438 CREB3L3Q68CJ9 461 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 GPR155Q7Z3F1 870 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 NEDD1Q8NHV4 660 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 RUNDC3BQ96NL0 473 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 SLF1Q9BQI6 1058 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 RHOXF2Q9BQY4 288 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 ACPTQ9BZG2 426 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 DNAAF2Q9NVR5 837 aaKnown RBP11.38□□□□□ -0.59
SYNE2-206ENST00000441438 NHSQ6T4R5 1651 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 PNMA6FA0A0J9YX94 578 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 B4DLN1 442 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 EIF3CLB5ME19 914 aaKnown RBP11.38□□□□□ -0.59
SYNE2-206ENST00000441438 THAP12O43422 761 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 UBL4AP11441 157 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 GCFC2P16383 781 aaKnown RBP11.38□□□□□ -0.59
SYNE2-206ENST00000441438 ZFXP17010 805 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-206ENST00000441438 CDH3P22223 829 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 DCAF7P61962 342 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 MAP3K9P80192 1104 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 ATP2B2Q01814 1243 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 PPARDQ03181 441 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 TRPC3Q13507 836 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 CRYMQ14894 314 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 DDR2Q16832 855 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 MOSPD2Q8NHP6 518 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 FERMT2Q96AC1 680 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 EIF3CQ99613 913 aaKnown RBP11.38□□□□□ -0.59
SYNE2-206ENST00000441438 ZNF277Q9NRM2 450 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-206ENST00000441438 MTRF1LQ9UGC7 380 aaKnown RBP11.38□□□□□ -0.59
SYNE2-206ENST00000441438 AK5Q9Y6K8 562 aa11.38□□□□□ -0.59
SYNE2-206ENST00000441438 RSPH10B2B2RC85 870 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 K7EPI3 171 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 SRGAP2O75044 1071 aa11.37□□□□□ -0.59
SYNE2-206ENST00000441438 SLITRK5O94991 958 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms