RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 MSANTD4Q8NCY6 345 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 OR8K1Q8NGG5 319 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 TMEM143Q96AN5 459 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 GPRASP2Q96D09 838 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CDHR1Q96JP9 859 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CDC23Q9UJX2 597 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 RAB21Q9UL25 225 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 SLC4A7Q9Y6M7 1214 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 MROH7Q68CQ1 1323 aa5.21□□□□□ -1.57
EDEM3-203ENST00000439962 RBM47A0AV96 593 aaKnown RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 LCHNA4D1U4 455 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 N4BP3O15049 544 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 NBNO60934 754 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 ERLIN1O75477 346 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 CABYRO75952 493 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 GNA14O95837 355 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 GYPCP04921 128 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 CA3P07451 260 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 ATP2A2P16615 1042 aaKnown RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 ZSCAN20P17040 1043 aaPredicted RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 DNAJB2P25686 324 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 CST5P28325 142 aaPredicted RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 CYLC1P35663 651 aaPredicted RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 PBX3P40426 434 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 PRKCEQ02156 737 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 RBL2Q08999 1139 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 TBC1D8BQ0IIM8 1120 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 MBTPS1Q14703 1052 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 NAALADL2Q58DX5 795 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 TMEM240Q5SV17 173 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 TTI2Q6NXR4 508 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 FBXO38Q6PIJ6 1188 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 USP49Q70CQ1 688 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 RHPN2Q8IUC4 686 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 NLRP7Q8WX94 980 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 MYLIPQ8WY64 445 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 LENG9Q96B70 501 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 DYDC2Q96IM9 177 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 KATNAL1Q9BW62 490 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 TEKT3Q9BXF9 490 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 UBXN6Q9BZV1 441 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 NT5C3AQ9H0P0 336 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 SMARCAD1Q9H4L7 1026 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 WRAP73Q9P2S5 460 aaPredicted RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 PCDHA12Q9UN75 941 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 CTNND2Q9UQB3 1225 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 PCDHA10Q9Y5I2 948 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 CTAGE9A4FU28 777 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 TBX3O15119 743 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 DHX15O43143 795 aaKnown RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 ZNF862O60290 1169 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 LCA5LO95447 670 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 CD4P01730 458 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 PRLRP16471 622 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 ATP4AP20648 1035 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 ANXA13P27216 316 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 AFMP43652 599 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 GATMP50440 423 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 NLRP11P59045 1033 aaKnown RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 GNG11P61952 73 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 ZBED6P86452 979 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 PPP2R3AQ06190 1150 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 CKAP4Q07065 602 aaKnown RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 ELF2Q15723 593 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 IQCEQ6IPM2 695 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 EFCAB12Q6NXP0 572 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 MIS18BP1Q6P0N0 1132 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 KCNV1Q6PIU1 500 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 UNC13DQ70J99 1090 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 ZNF572Q7Z3I7 529 aaPredicted RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 CABP7Q86V35 215 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 GUF1Q8N442 669 aaKnown RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 PDILTQ8N807 584 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 SYN2Q92777 582 aaPredicted RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 P2RX5Q93086 422 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 MTMR9Q96QG7 549 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 PBX4Q9BYU1 374 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 IFIH1Q9BYX4 1025 aaKnown RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 NKX2-4Q9H2Z4 354 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 ZHX3Q9H4I2 956 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 SLC28A3Q9HAS3 691 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 MAP3K20Q9NYL2 800 aaKnown RBP5.21□□□□□ -1.58
EDEM3-203ENST00000439962 HCSTQ9UBK5 93 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 CDY2AQ9Y6F7 541 aa5.21□□□□□ -1.58
EDEM3-203ENST00000439962 TARSL2A2RTX5 802 aaKnown RBP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 SFI1A8K8P3 1242 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 EIF3CLB5ME19 914 aaKnown RBP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 TLL1O43897 1013 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 USO1O60763 962 aaKnown RBP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 URI1O94763 535 aaPredicted RBP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 ARHGEF15O94989 841 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 MUTP22033 750 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 PRCPP42785 496 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 MARSP56192 900 aaKnown RBP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 GPS2Q13227 327 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 MKRN4PQ13434 485 aaPredicted RBP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 BFSP2Q13515 415 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 SPEGQ15772 3267 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 TMEM132AQ24JP5 1023 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 TMEM119Q4V9L6 283 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms