RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 GDF3Q9NR23 364 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 AMFRQ9UKV5 643 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 USH1CQ9Y6N9 552 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 SPOPO43791 374 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 KRT16P08779 473 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 SLC8A1P32418 973 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 STX2P32856 288 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 TMEM119Q4V9L6 283 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 LMBRD2Q68DH5 695 aaPredicted RBP10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 SAAL1Q96ER3 474 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 PARVGQ9HBI0 331 aa10.69□□□□□ -0.7
CDC42SE1-202ENST00000439374 POC1B-GALNT4F8VUJ3 575 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 NOL4O94818 638 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 GNA14O95837 355 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 TARSP26639 723 aaKnown RBP10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 LACTBP83111 547 aaPredicted RBP10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 SATB1Q01826 763 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 NAB2Q15742 525 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 GLE1Q53GS7 698 aaKnown RBP10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 TRPM8Q7Z2W7 1104 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 TRIM59Q8IWR1 403 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 ATG4AQ8WYN0 398 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 INPP4AQ96PE3 977 aaPredicted RBP10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 ACTR5Q9H9F9 607 aaPredicted RBP10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 SPATS2LQ9NUQ6 558 aaKnown RBP10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 DCTN4Q9UJW0 460 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 PPP1R9AQ9ULJ8 1098 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 PON1P27169 355 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 USP11P51784 963 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 NPEPPSP55786 919 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 PEX3P56589 373 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 EN1Q05925 392 aaPredicted RBP10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 HGSNATQ68CP4 663 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 RINT1Q6NUQ1 792 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 NEK9Q8TD19 979 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 SPOCK2Q92563 424 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 FAXDC2Q96IV6 333 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 ZNF668Q96K58 619 aaPredicted RBP10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 LXNQ9BS40 222 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 TAS2R14Q9NYV8 317 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 PHLPP1O60346 1717 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 hCG_1984214I3L0E3 225 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 SLC16A4O15374 487 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 MSH2P43246 934 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 PMS2P54278 862 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 GALCP54803 685 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 XKR9Q5GH70 373 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 WDR78Q5VTH9 848 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 HHIPL2Q6UWX4 724 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 ZNF713Q8N859 430 aaPredicted RBP10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 C9orf72Q96LT7 481 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 CHD4Q14839 1912 aa10.68□□□□□ -0.7
CDC42SE1-202ENST00000439374 F8VZ95 297 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 IPO5O00410 1097 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 RASGRF2O14827 1237 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 SPATA31C1P0DKV0 1188 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 DRD4P21917 467 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 PSMC2P35998 433 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 RAD23BP54727 409 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 ATP11AP98196 1134 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 MDH1BQ5I0G3 518 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 MEI1Q5TIA1 1274 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 PLA2G4FQ68DD2 849 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 INTS8Q75QN2 995 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 TMC3Q7Z5M5 1100 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 DCAF4Q8WV16 495 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 TATDN2Q93075 761 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 ISCUQ9H1K1 167 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 AJAP1Q9UKB5 411 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 IRS2Q9Y4H2 1338 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 COL14A1Q05707 1796 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 RPA1P27694 616 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 HOXA10P31260 410 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 SLC12A3P55017 1021 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 KIAA1755Q5JYT7 1200 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 LDHDQ86WU2 507 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 PALB2Q86YC2 1186 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 KLF6Q99612 283 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.67□□□□□ -0.77e-7■□□□□ 9.3
CDC42SE1-202ENST00000439374 PLCB1Q9NQ66 1216 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 KLHL11Q9NVR0 708 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 TTC7AQ9ULT0 858 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 USTQ9Y2C2 406 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 SHANK3Q9BYB0 1731 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 GOLGA8RI6L899 631 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 KIF1CO43896 1103 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 HIP1RO75146 1068 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 FECHP22830 423 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 MYL7Q01449 175 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 TMEM132AQ24JP5 1023 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 BZW1Q7L1Q6 419 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 SIAH1Q8IUQ4 282 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 ARMC2Q8NEN0 867 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 CERKQ8TCT0 537 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 CEP63Q96MT8 703 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 WDR11Q9BZH6 1224 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 NOP53Q9NZM5 478 aaKnown RBP10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 HAO1Q9UJM8 370 aa10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 ZMYND8Q9ULU4 1186 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-202ENST00000439374 TRPC6Q9Y210 931 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms