RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 PPP4R3CPQ6ZMV5 832 aa25.48■■□□□ 1.67
SMARCAL1-208ENST00000434435 NELFBQ8WX92 580 aa25.48■■□□□ 1.67
SMARCAL1-208ENST00000434435 P2RX5Q93086 422 aa25.48■■□□□ 1.67
SMARCAL1-208ENST00000434435 FZD8Q9H461 694 aa25.48■■□□□ 1.67
SMARCAL1-208ENST00000434435 CCDC85CA6NKD9 419 aa25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 ERLIN2O94905 339 aa25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 CAVIN2O95810 425 aa25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 SELPP16109 830 aa25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 CCNE1P24864 410 aa25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 ERCC5P28715 1186 aaPredicted RBP25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 HOXD13P35453 343 aa25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 LRRC8DQ7L1W4 858 aa25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 TMEM40Q8WWA1 233 aa25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 PRIMPOLQ96LW4 560 aa25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 NOC4LQ9BVI4 516 aaKnown RBP25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 MRPL4Q9BYD3 311 aaKnown RBP25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 GBP3Q9H0R5 595 aa25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 KCTD10Q9H3F6 313 aa25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 HIPK3Q9H422 1215 aa25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 TYW1Q9NV66 732 aaKnown RBP25.47■■□□□ 1.67
SMARCAL1-208ENST00000434435 BICDL2A1A5D9 508 aa25.46■■□□□ 1.67
SMARCAL1-208ENST00000434435 ACKR2O00590 384 aa25.46■■□□□ 1.67
SMARCAL1-208ENST00000434435 PIGRP01833 764 aa25.46■■□□□ 1.67
SMARCAL1-208ENST00000434435 CENPPQ6IPU0 288 aa25.46■■□□□ 1.67
SMARCAL1-208ENST00000434435 HS2ST1Q7LGA3 356 aa25.46■■□□□ 1.67
SMARCAL1-208ENST00000434435 CATSPER4Q7RTX7 472 aa25.46■■□□□ 1.67
SMARCAL1-208ENST00000434435 TSG101Q99816 390 aa25.46■■□□□ 1.67
SMARCAL1-208ENST00000434435 TMEM39AQ9NV64 488 aa25.46■■□□□ 1.67
SMARCAL1-208ENST00000434435 TBX21Q9UL17 535 aa25.46■■□□□ 1.67
SMARCAL1-208ENST00000434435 CNTNAP2Q9UHC6 1331 aa25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 HNRNPDLO14979 420 aaKnown RBP25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 CALUO43852 315 aaPredicted RBP25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 CSDE1O75534 798 aaKnown RBP25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 LIG4P49917 911 aa25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 PRPF4BQ13523 1007 aaKnown RBP25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 AMHR2Q16671 573 aa25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 TMEM132AQ24JP5 1023 aa25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 FBXO47Q5MNV8 452 aa25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 TRAF7Q6Q0C0 670 aa25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 GOLGA5Q8TBA6 731 aa25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 SEMA6BQ9H3T3 888 aa25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 CGNQ9P2M7 1197 aaKnown RBP25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 RWDD2AQ9UIY3 292 aa25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 SQORQ9Y6N5 450 aa25.45■■□□□ 1.66
SMARCAL1-208ENST00000434435 PDXKO00764 312 aa25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 RPS6KA5O75582 802 aa25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 EDN1P05305 212 aa25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 IQCF3P0C7M6 154 aa25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 FGFR4P22455 802 aa25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 ZNF165P49910 485 aa25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 STX17P56962 302 aa25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 LRRC63Q05C16 580 aa25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 ZPBP2Q6X784 338 aa25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 USP38Q8NB14 1042 aa25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 BPIFA3Q9BQP9 254 aa25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 PPP1R12CQ9BZL4 782 aa25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 NOC2LQ9Y3T9 749 aaKnown RBP25.44■■□□□ 1.66
SMARCAL1-208ENST00000434435 TRIM49BA6NDI0 452 aa25.43■■□□□ 1.66
SMARCAL1-208ENST00000434435 TSPAN1O60635 241 aa25.43■■□□□ 1.66
SMARCAL1-208ENST00000434435 GHRP10912 638 aa25.43■■□□□ 1.66
SMARCAL1-208ENST00000434435 SNRPFP62306 86 aaKnown RBP25.43■■□□□ 1.66
SMARCAL1-208ENST00000434435 NCBP1Q09161 790 aaKnown RBP25.43■■□□□ 1.66
SMARCAL1-208ENST00000434435 ZCWPW2Q504Y3 356 aa25.43■■□□□ 1.66
SMARCAL1-208ENST00000434435 FOXR2Q6PJQ5 311 aa25.43■■□□□ 1.66
SMARCAL1-208ENST00000434435 FAM228AQ86W67 206 aa25.43■■□□□ 1.66
SMARCAL1-208ENST00000434435 ACO2Q99798 780 aaKnown RBP25.43■■□□□ 1.66
SMARCAL1-208ENST00000434435 TARS2Q9BW92 718 aaKnown RBP25.43■■□□□ 1.66
SMARCAL1-208ENST00000434435 IKZF4Q9H2S9 585 aa25.43■■□□□ 1.66
SMARCAL1-208ENST00000434435 TRAF3IP3Q9Y228 551 aa25.43■■□□□ 1.66
SMARCAL1-208ENST00000434435 B4GALT5O43286 388 aa25.42■■□□□ 1.66
SMARCAL1-208ENST00000434435 TGFB1I1O43294 461 aa25.42■■□□□ 1.66
SMARCAL1-208ENST00000434435 AXLP30530 894 aa25.42■■□□□ 1.66
SMARCAL1-208ENST00000434435 LPIN1Q14693 890 aa25.42■■□□□ 1.66
SMARCAL1-208ENST00000434435 ATF7IP2Q5U623 682 aa25.42■■□□□ 1.66
SMARCAL1-208ENST00000434435 ANKRD40Q6AI12 368 aa25.42■■□□□ 1.66
SMARCAL1-208ENST00000434435 TTI2Q6NXR4 508 aa25.42■■□□□ 1.66
SMARCAL1-208ENST00000434435 TSHZ1Q6ZSZ6 1077 aa25.42■■□□□ 1.66
SMARCAL1-208ENST00000434435 HTATIP2Q9BUP3 242 aa25.42■■□□□ 1.66
SMARCAL1-208ENST00000434435 PRDM5Q9NQX1 630 aaPredicted RBP25.42■■□□□ 1.66
SMARCAL1-208ENST00000434435 AGPAT3Q9NRZ7 376 aa25.42■■□□□ 1.66
SMARCAL1-208ENST00000434435 AGPAT5Q9NUQ2 364 aa25.42■■□□□ 1.66
SMARCAL1-208ENST00000434435 UMODL1Q5DID0 1318 aa25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 GPR182O15218 404 aa25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 PARNO95453 639 aaKnown RBP25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 ARF4P18085 180 aaPredicted RBP25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 PMS1P54277 932 aaKnown RBP25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 PAK2Q13177 524 aa25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 EDRF1Q3B7T1 1238 aa25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 ARMCX5Q6P1M9 558 aa25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 SLC39A4Q6P5W5 647 aa25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 ENOX1Q8TC92 643 aaKnown RBP25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 FAM200AQ8TCP9 573 aa25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 USP20Q9Y2K6 914 aa25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 LTBP2Q14767 1821 aa25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 CITO14578 2027 aa25.41■■□□□ 1.66
SMARCAL1-208ENST00000434435 TET1Q8NFU7 2136 aa25.4■■□□□ 1.66
SMARCAL1-208ENST00000434435 TTLL13PA6NNM8 815 aa25.4■■□□□ 1.66
SMARCAL1-208ENST00000434435 ANKRD63C9JTQ0 380 aa25.4■■□□□ 1.66
SMARCAL1-208ENST00000434435 N4BP3O15049 544 aa25.4■■□□□ 1.66
SMARCAL1-208ENST00000434435 KIAA0355O15063 1070 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms