RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 BTBD6Q96KE9 485 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 CYP39A1Q9NYL5 469 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 CICQ96RK0 1608 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 CALUO43852 315 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 EDIL3O43854 480 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 NR3C1P04150 777 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 PYGMP11217 842 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 RASA1P20936 1047 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 CHKAP35790 457 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 ERFP50548 548 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 DRG2P55039 364 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 PSMC6P62333 389 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 PPATQ06203 517 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 EDRF1Q3B7T1 1238 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 CPNE8Q86YQ8 564 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 CEP95Q96GE4 821 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 SIX2Q9NPC8 291 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 DIS3Q9Y2L1 958 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 TNS2Q63HR2 1409 aa12.4□□□□□ -0.43
HMGCS1-202ENST00000433297 PASKQ96RG2 1323 aa12.4□□□□□ -0.43
HMGCS1-202ENST00000433297 ANKRD33BA6NCL7 494 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 RSPH10B2B2RC85 870 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 SPOPO43791 374 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 RSPH10BP0C881 870 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 GNAZP19086 355 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 ATP6V1C1P21283 382 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 ATP5DP30049 168 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 RFC4P35249 363 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 CYP4A11Q02928 519 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 LAMB3Q13751 1172 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 DPY19L2P1Q6NXN4 242 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 ARHGEF18Q6ZSZ5 1173 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 SLC35C1Q96A29 364 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 TBC1D10AQ9BXI6 508 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 SLCO1B3Q9NPD5 702 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 MTUS1Q9ULD2 1270 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 LRRC42Q9Y546 428 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 DLATP10515 647 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 COMTP21964 271 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 ROR2Q01974 943 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 RRP1BQ14684 758 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 ARSHQ5FYA8 562 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 ANKLE1Q8NAG6 615 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 INTUQ9ULD6 942 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 G3BP2Q9UN86 482 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 SYNGAP1Q96PV0 1343 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 TOM1O60784 492 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 FTLP02792 175 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 FOXN2P32314 431 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 COILP38432 576 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 SSR1P43307 286 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 RANBP1P43487 201 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 RCN2Q14257 317 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 ERFEQ4G0M1 354 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 CAPN12Q6ZSI9 719 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 PRUNE1Q86TP1 453 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 TXNRD3Q86VQ6 643 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 CLEC10AQ8IUN9 316 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 ROPN1BQ9BZX4 212 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 ROPN1Q9HAT0 212 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 PRKAG3Q9UGI9 489 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 MYH3P11055 1940 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 PITPNM2Q9BZ72 1349 aa12.39□□□□□ -0.43
HMGCS1-202ENST00000433297 MED24O75448 989 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 ECEL1O95672 775 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 TRIM49P0CI25 452 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 TRIM49CP0CI26 452 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 RPL13P26373 211 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 SLC16A2P36021 539 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 JAM2P57087 298 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 TMED2Q15363 201 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 GRIPAP1Q4V328 841 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 ZC3H18Q86VM9 953 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 MFN1Q8IWA4 741 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 DTX3LQ8TDB6 740 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 MOV10L1Q9BXT6 1211 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 VCXQ9H320 206 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 RASA4BC9J798 803 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 RASA4O43374 803 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 RTN3O95197 1032 aaPredicted RBP12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 CCNB1P14635 433 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 MTFR1Q15390 333 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 HP1BP3Q5SSJ5 553 aaPredicted RBP12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 CYP4F22Q6NT55 531 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 RFX8Q6ZV50 586 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 EPM2AIP1Q7L775 607 aaPredicted RBP12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 SLC20A1Q8WUM9 679 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 ART4Q93070 314 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 C9orf72Q96LT7 481 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 SERPINB12Q96P63 405 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 REEP2Q9BRK0 252 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 SP100P23497 879 aaPredicted RBP12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 ALDH3A1P30838 453 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 CDK8P49336 464 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 CYP2J2P51589 502 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 IL9RQ01113 521 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 KRT17Q04695 432 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 STRN3Q13033 797 aa12.38□□□□□ -0.43
HMGCS1-202ENST00000433297 MFSD5Q6N075 450 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms