RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CATSPER4Q7RTX7 472 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 MAP4K3Q8IVH8 894 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 TMEM199Q8N511 208 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 GLIS3Q8NEA6 775 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 SCFD1Q8WVM8 642 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 FGFBP2Q9BYJ0 223 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 GDAQ9Y2T3 454 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 NOC2LQ9Y3T9 749 aaKnown RBP16.93■□□□□ 0.3
COL11A1-204ENST00000427239 UMODL1Q5DID0 1318 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 CCL23P55773 120 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 PRPF4BQ13523 1007 aaKnown RBP16.93■□□□□ 0.3
COL11A1-204ENST00000427239 MBTPS1Q14703 1052 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 KNOP1Q1ED39 458 aaKnown RBP16.93■□□□□ 0.3
COL11A1-204ENST00000427239 TAS1R3Q7RTX0 852 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 C7orf61Q8IZ16 206 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 MRPL4Q9BYD3 311 aaKnown RBP16.93■□□□□ 0.3
COL11A1-204ENST00000427239 WNT8AQ9H1J5 351 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 PADI3Q9ULW8 664 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 ST3GAL5Q9UNP4 418 aa16.93■□□□□ 0.3
COL11A1-204ENST00000427239 PRPF6O94906 941 aaKnown RBP16.92■□□□□ 0.3
COL11A1-204ENST00000427239 GHRP10912 638 aa16.92■□□□□ 0.3
COL11A1-204ENST00000427239 PRCPP42785 496 aa16.92■□□□□ 0.3
COL11A1-204ENST00000427239 PAK2Q13177 524 aa16.92■□□□□ 0.3
COL11A1-204ENST00000427239 AMHR2Q16671 573 aa16.92■□□□□ 0.3
COL11A1-204ENST00000427239 CT47A1Q5JQC4 288 aaPredicted RBP16.92■□□□□ 0.3
COL11A1-204ENST00000427239 ZPBP2Q6X784 338 aa16.92■□□□□ 0.3
COL11A1-204ENST00000427239 SYCP3Q8IZU3 236 aa16.92■□□□□ 0.3
COL11A1-204ENST00000427239 ADSSL1Q8N142 457 aa16.92■□□□□ 0.3
COL11A1-204ENST00000427239 AGO3Q9H9G7 860 aaKnown RBP16.92■□□□□ 0.3
COL11A1-204ENST00000427239 CHST12Q9NRB3 414 aa16.92■□□□□ 0.3
COL11A1-204ENST00000427239 DACH1Q9UI36 760 aa16.92■□□□□ 0.3
COL11A1-204ENST00000427239 NR2E3Q9Y5X4 410 aa16.92■□□□□ 0.3
COL11A1-204ENST00000427239 SYCE3A1L190 88 aa16.91■□□□□ 0.3
COL11A1-204ENST00000427239 NBNO60934 754 aa16.91■□□□□ 0.3
COL11A1-204ENST00000427239 PIGRP01833 764 aa16.91■□□□□ 0.3
COL11A1-204ENST00000427239 CCDC192P0DO97 292 aa16.91■□□□□ 0.3
COL11A1-204ENST00000427239 SNRPFP62306 86 aaKnown RBP16.91■□□□□ 0.3
COL11A1-204ENST00000427239 KCNA1Q09470 495 aa16.91■□□□□ 0.3
COL11A1-204ENST00000427239 NFX1Q12986 1120 aaKnown RBP16.91■□□□□ 0.3
COL11A1-204ENST00000427239 FAM228AQ86W67 206 aa16.91■□□□□ 0.3
COL11A1-204ENST00000427239 SMYD4Q8IYR2 804 aaPredicted RBP16.91■□□□□ 0.3
COL11A1-204ENST00000427239 DHTKD1Q96HY7 919 aaPredicted RBP16.91■□□□□ 0.3
COL11A1-204ENST00000427239 SCLYQ96I15 445 aa16.91■□□□□ 0.3
COL11A1-204ENST00000427239 IFIH1Q9BYX4 1025 aaKnown RBP16.91■□□□□ 0.3
COL11A1-204ENST00000427239 ANO10Q9NW15 660 aa16.91■□□□□ 0.3
COL11A1-204ENST00000427239 CGNQ9P2M7 1197 aaKnown RBP16.91■□□□□ 0.3
COL11A1-204ENST00000427239 MAPK8IP1Q9UQF2 711 aa16.91■□□□□ 0.3
COL11A1-204ENST00000427239 CNTNAP2Q9UHC6 1331 aa16.91■□□□□ 0.3
COL11A1-204ENST00000427239 A0A1B0GUA9 196 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 PPP1R3GB7ZBB8 358 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 PSMA7O14818 248 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 HNRNPDLO14979 420 aaKnown RBP16.9■□□□□ 0.3
COL11A1-204ENST00000427239 TSPAN1O60635 241 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 CXCL10P02778 98 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 ITGB8P26012 769 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 CD52P31358 61 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 GPNMBQ14956 572 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 PLEKHG4Q58EX7 1191 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 RPUSD2Q8IZ73 545 aaKnown RBP16.9■□□□□ 0.3
COL11A1-204ENST00000427239 APBB2Q92870 758 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 BICD1Q96G01 975 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 ACO2Q99798 780 aaKnown RBP16.9■□□□□ 0.3
COL11A1-204ENST00000427239 FTHL17Q9BXU8 183 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 GBP3Q9H0R5 595 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 ERVK-5Q9HDB9 667 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 AGPAT5Q9NUQ2 364 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 PDXKO00764 312 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 TOM1L1O75674 476 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 PFKMP08237 780 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 ARF4P18085 180 aaPredicted RBP16.9■□□□□ 0.3
COL11A1-204ENST00000427239 FGFR4P22455 802 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 HOXA11P31270 313 aaPredicted RBP16.9■□□□□ 0.3
COL11A1-204ENST00000427239 HOXD13P35453 343 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 LIG4P49917 911 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 STX1AQ16623 288 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 TMEM132AQ24JP5 1023 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 ATF7IP2Q5U623 682 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 NOTUMQ6P988 496 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 HS2ST1Q7LGA3 356 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 NELFCDQ8IXH7 590 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 GOLGA5Q8TBA6 731 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 SEPT8Q92599 483 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 OSBPL7Q9BZF2 842 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 TNFSF13BQ9Y275 285 aa16.9■□□□□ 0.3
COL11A1-204ENST00000427239 B4GALT5O43286 388 aa16.89■□□□□ 0.29
COL11A1-204ENST00000427239 ZSCAN20P17040 1043 aaPredicted RBP16.89■□□□□ 0.29
COL11A1-204ENST00000427239 RGS19P49795 217 aa16.89■□□□□ 0.29
COL11A1-204ENST00000427239 TYRO3Q06418 890 aa16.89■□□□□ 0.29
COL11A1-204ENST00000427239 DPCR1Q3MIW9 517 aa16.89■□□□□ 0.29
COL11A1-204ENST00000427239 SLFN12LQ6IEE8 588 aa16.89■□□□□ 0.29
COL11A1-204ENST00000427239 CENPPQ6IPU0 288 aa16.89■□□□□ 0.29
COL11A1-204ENST00000427239 CCDC51Q96ER9 411 aa16.89■□□□□ 0.29
COL11A1-204ENST00000427239 TARS2Q9BW92 718 aaKnown RBP16.89■□□□□ 0.29
COL11A1-204ENST00000427239 GZF1Q9H116 711 aaPredicted RBP16.89■□□□□ 0.29
COL11A1-204ENST00000427239 KCTD10Q9H3F6 313 aa16.89■□□□□ 0.29
COL11A1-204ENST00000427239 PIN4Q9Y237 131 aaKnown RBP16.89■□□□□ 0.29
COL11A1-204ENST00000427239 CLDN3O15551 220 aa16.88■□□□□ 0.29
COL11A1-204ENST00000427239 CSF2RAP15509 400 aa16.88■□□□□ 0.29
COL11A1-204ENST00000427239 CD44P16070 742 aaKnown RBP16.88■□□□□ 0.29
COL11A1-204ENST00000427239 APBB1IPQ7Z5R6 666 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms