RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 CBWD5Q5RIA9 395 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 KLHDC7AQ5VTJ3 777 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 RDH13Q8NBN7 331 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 ZSWIM2Q8NEG5 633 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 ZIC5Q96T25 663 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 SIX2Q9NPC8 291 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 GCNT4Q9P109 453 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 MYO6Q9UM54 1294 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 GNEQ9Y223 722 aaKnown RBP16.57■□□□□ 0.24
ACTB-204ENST00000425660 COL1A2P08123 1366 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 KIAA0391O15091 583 aaKnown RBP16.56■□□□□ 0.24
ACTB-204ENST00000425660 C22orf31O95567 290 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 MMP3P08254 477 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 TRIM49P0CI25 452 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 TRIM49CP0CI26 452 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 ZNF865P0CJ78 1059 aaPredicted RBP16.56■□□□□ 0.24
ACTB-204ENST00000425660 C1orf220Q5T0J3 134 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 TRIM65Q6PJ69 517 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 APBA2Q99767 749 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 NHEJ1Q9H9Q4 299 aaPredicted RBP16.56■□□□□ 0.24
ACTB-204ENST00000425660 ARHGAP20Q9P2F6 1191 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 ZNF215Q9UL58 517 aaPredicted RBP16.56■□□□□ 0.24
ACTB-204ENST00000425660 N4BP1O75113 896 aaKnown RBP16.56■□□□□ 0.24
ACTB-204ENST00000425660 ADRB2P07550 413 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 DLG4P78352 724 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 APBA1Q02410 837 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 TNFAIP2Q03169 654 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 LAMTOR4Q0VGL1 99 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 CBWD2Q8IUF1 395 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 PLEKHO2Q8TD55 490 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 POMGNT1Q8WZA1 660 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 MFSD14AQ96MC6 490 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 CCDC113Q9H0I3 377 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 SUGCTQ9HAC7 445 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 NLRC4Q9NPP4 1024 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 AIPL1Q9NZN9 384 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 DAAM1Q9Y4D1 1078 aa16.56■□□□□ 0.24
ACTB-204ENST00000425660 A6NJR5 290 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 H3BRB1 525 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 TNPO2O14787 897 aaKnown RBP16.55■□□□□ 0.24
ACTB-204ENST00000425660 ALDH1A1P00352 501 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 ACTN1P12814 892 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 INSRRP14616 1297 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 CYLC1P35663 651 aaPredicted RBP16.55■□□□□ 0.24
ACTB-204ENST00000425660 LIG4P49917 911 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 ETF1P62495 437 aaKnown RBP16.55■□□□□ 0.24
ACTB-204ENST00000425660 DGKDQ16760 1214 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 HGSNATQ68CP4 663 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 SLFN12LQ6IEE8 588 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 ZPBP2Q6X784 338 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 PAXIP1Q6ZW49 1069 aaPredicted RBP16.55■□□□□ 0.24
ACTB-204ENST00000425660 GPD1LQ8N335 351 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 LRRC71Q8N4P6 559 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 LINC01465Q8N7H1 131 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 OR6J1Q8NGC5 347 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 TMC2Q8TDI7 906 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 PARD3BQ8TEW8 1205 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 BICD1Q96G01 975 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 PRIMPOLQ96LW4 560 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 TUT1Q9H6E5 874 aaKnown RBP16.55■□□□□ 0.24
ACTB-204ENST00000425660 KIAA1586Q9HCI6 787 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 REXO2Q9Y3B8 237 aaKnown RBP16.55■□□□□ 0.24
ACTB-204ENST00000425660 DOCK3Q8IZD9 2030 aa16.55■□□□□ 0.24
ACTB-204ENST00000425660 SSU72P8A0A1W2PR75 194 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 EIF3CLB5ME19 914 aaKnown RBP16.54■□□□□ 0.24
ACTB-204ENST00000425660 MAGEB2O15479 319 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 ASAP2O43150 1006 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 MSCO60682 206 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 ZNF286BP0CG31 522 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 CTGFP29279 349 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 TERF1P54274 439 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 MYL7Q01449 175 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 PPP3CAQ08209 521 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
ACTB-204ENST00000425660 CYP4F22Q6NT55 531 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 ZNF662Q6ZS27 426 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 ACRBPQ8NEB7 543 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 LMO3Q8TAP4 145 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 TRAPPC12Q8WVT3 735 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 SAAL1Q96ER3 474 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 EIF3CQ99613 913 aaKnown RBP16.54■□□□□ 0.24
ACTB-204ENST00000425660 NFKBIZQ9BYH8 718 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 C2orf40Q9H1Z8 148 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 SUCLA2Q9P2R7 463 aaPredicted RBP16.54■□□□□ 0.24
ACTB-204ENST00000425660 PAXBP1Q9Y5B6 917 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 GOLGA8IPA6NC78 632 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 GOLGA8JA6NMD2 632 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 EXTL3O43909 919 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 LCA5LO95447 670 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 JAM2P57087 298 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 POU5F1BQ06416 359 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 NOGQ13253 232 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 HSP90AA2PQ14568 343 aaPredicted RBP16.54■□□□□ 0.24
ACTB-204ENST00000425660 CCL14Q16627 93 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 ASTE1Q2TB18 679 aaPredicted RBP16.54■□□□□ 0.24
ACTB-204ENST00000425660 SFMBT2Q5VUG0 894 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 EFCAB12Q6NXP0 572 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 USP37Q86T82 979 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 RNF149Q8NC42 400 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 CCDC42Q96M95 316 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms