RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 TAL1P17542 331 aaPredicted RBP15.5■□□□□ 0.07
MSH5-206ENST00000423982 PRKCIP41743 596 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 CYP4A11Q02928 519 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 SLC29A2Q14542 456 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 KNOP1Q1ED39 458 aaKnown RBP15.5■□□□□ 0.07
MSH5-206ENST00000423982 EDRF1Q3B7T1 1238 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 TBC1D1Q86TI0 1168 aaPredicted RBP15.5■□□□□ 0.07
MSH5-206ENST00000423982 CATSPER3Q86XQ3 398 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 KSR1Q8IVT5 923 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 CCDC197Q8NCU1 140 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 ALG3Q92685 438 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 WRNIP1Q96S55 665 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 NT5C3AQ9H0P0 336 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 FAM114A2Q9NRY5 505 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 L3MBTL1Q9Y468 752 aa15.5■□□□□ 0.07
MSH5-206ENST00000423982 MGRN1O60291 552 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 ATP6V1G2O95670 118 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 CLTAP09496 248 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 HYIQ5T013 277 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 PNMA8AQ86V59 439 aaPredicted RBP15.49■□□□□ 0.07
MSH5-206ENST00000423982 APOBEC3FQ8IUX4 373 aaKnown RBP15.49■□□□□ 0.07
MSH5-206ENST00000423982 SULF1Q8IWU6 871 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 EPS8L3Q8TE67 593 aaKnown RBP15.49■□□□□ 0.07
MSH5-206ENST00000423982 CUL5Q93034 780 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 DCPSQ96C86 337 aaKnown RBP15.49■□□□□ 0.07
MSH5-206ENST00000423982 C18orf8Q96DM3 657 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 SEMA4AQ9H3S1 761 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 PSTPIP2Q9H939 334 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 NOD2Q9HC29 1040 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 SEPT11Q9NVA2 429 aaKnown RBP15.49■□□□□ 0.07
MSH5-206ENST00000423982 BZW2Q9Y6E2 419 aaKnown RBP15.49■□□□□ 0.07
MSH5-206ENST00000423982 ASTN1O14525 1302 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 FOXO6A8MYZ6 492 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 SMARCA1P28370 1054 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 CAP2P40123 477 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 MARCKSL1P49006 195 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 KLRC3Q07444 240 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 LLGL1Q15334 1064 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 ZDHHC24Q6UX98 284 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 FRMD5Q7Z6J6 570 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 STAMBPL1Q96FJ0 436 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 P2RX7Q99572 595 aaKnown RBP15.49■□□□□ 0.07
MSH5-206ENST00000423982 CCDC113Q9H0I3 377 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 KDM4CQ9H3R0 1056 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 ABCF3Q9NUQ8 709 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 AGAP1Q9UPQ3 857 aa15.49■□□□□ 0.07
MSH5-206ENST00000423982 KDM3AQ9Y4C1 1321 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 PNMA6FA0A0J9YX94 578 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 NR3C1P04150 777 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 KRT13P13646 458 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 FGFR4P22455 802 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 PMS2P54278 862 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 DUPD1Q68J44 220 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 MIEF2Q96C03 454 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 ERP44Q9BS26 406 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 COG5Q9UP83 839 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 DAAM1Q9Y4D1 1078 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 F5H6K3 240 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 DNAJC8O75937 253 aaPredicted RBP15.48■□□□□ 0.07
MSH5-206ENST00000423982 PAX7P23759 505 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 PTENP60484 403 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 KIAA1755Q5JYT7 1200 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 SLFN13Q68D06 897 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 MOB2Q70IA6 237 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 TEX2Q8IWB9 1127 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 THAP2Q9H0W7 228 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 ZNF408Q9H9D4 720 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 DBR1Q9UK59 544 aaKnown RBP15.48■□□□□ 0.07
MSH5-206ENST00000423982 TRAF3IP3Q9Y228 551 aa15.48■□□□□ 0.07
MSH5-206ENST00000423982 VIMP08670 466 aaKnown RBP15.47■□□□□ 0.07
MSH5-206ENST00000423982 EZRP15311 586 aaKnown RBP15.47■□□□□ 0.07
MSH5-206ENST00000423982 ZNF543Q08ER8 600 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 COG2Q14746 738 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 LRRC14Q15048 493 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 JAMLQ86YT9 394 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 ZDHHC14Q8IZN3 488 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 LMBR1Q8WVP7 490 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 ZNF341Q9BYN7 854 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 RPTORQ8N122 1335 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 HGSO14964 777 aaPredicted RBP15.47■□□□□ 0.07
MSH5-206ENST00000423982 SKAP2O75563 359 aaPredicted RBP15.47■□□□□ 0.07
MSH5-206ENST00000423982 GCNT3O95395 438 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 NDUFB10O96000 172 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 CDC25CP30307 473 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 MMP14P50281 582 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 CLNS1AP54105 237 aaKnown RBP15.47■□□□□ 0.07
MSH5-206ENST00000423982 PLS1Q14651 629 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 ASPRV1Q53RT3 343 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 PRR16Q569H4 304 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 SLC30A5Q8TAD4 765 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 NEK9Q8TD19 979 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 KRT35Q92764 455 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 PABPC3Q9H361 631 aaKnown RBP15.47■□□□□ 0.07
MSH5-206ENST00000423982 MLXIPLQ9NP71 852 aa15.47■□□□□ 0.07
MSH5-206ENST00000423982 TMEM110-MUSTN1A8MSY1 372 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 KIAA0391O15091 583 aaKnown RBP15.46■□□□□ 0.07
MSH5-206ENST00000423982 MMP13P45452 471 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 DENND2CQ68D51 928 aa15.46■□□□□ 0.07
MSH5-206ENST00000423982 TLDC1Q6P9B6 456 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms