RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 SFPQP23246 707 aaKnown RBP eCLIP11.65□□□□□ -0.54
RFC1-203ENST00000418436 DDIT3P35638 169 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 PHKA2P46019 1235 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 SARSP49591 514 aaKnown RBP11.65□□□□□ -0.54
RFC1-203ENST00000418436 SLC12A3P55017 1021 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 TFDP1Q14186 410 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 STK38Q15208 465 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 PCBP1Q15365 356 aaKnown RBP eCLIP11.65□□□□□ -0.54
RFC1-203ENST00000418436 ZRSR1Q15695 479 aaKnown RBP11.65□□□□□ -0.54
RFC1-203ENST00000418436 FAM102BQ5T8I3 360 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 FAM117BQ6P1L5 589 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 MAEAQ7L5Y9 396 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 NPAS4Q8IUM7 802 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 KRI1Q8N9T8 703 aaKnown RBP11.65□□□□□ -0.54
RFC1-203ENST00000418436 ZNF689Q96CS4 500 aaPredicted RBP11.65□□□□□ -0.54
RFC1-203ENST00000418436 EPSTI1Q96J88 318 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 CDK5RAP3Q96JB5 506 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 PLIN2Q99541 437 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 RUSC1Q9BVN2 902 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 TRAIPQ9BWF2 469 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 SLC28A3Q9HAS3 691 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 BLOC1S4Q9NUP1 217 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 MTMR10Q9NXD2 777 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 NLRC5Q86WI3 1866 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 RALGAPA2Q2PPJ7 1873 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 DENND3A2RUS2 1198 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 DGKIO75912 1065 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 PLA2G4BP0C869 781 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 ZSCAN20P17040 1043 aaPredicted RBP11.64□□□□□ -0.55
RFC1-203ENST00000418436 PLCG1P19174 1290 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 GUCY2CP25092 1073 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 HOXA11P31270 313 aaPredicted RBP11.64□□□□□ -0.55
RFC1-203ENST00000418436 TAP1Q03518 808 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 DNM1Q05193 864 aaKnown RBP11.64□□□□□ -0.55
RFC1-203ENST00000418436 MBTD1Q05BQ5 628 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 MAPK7Q13164 816 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 KARSQ15046 597 aaKnown RBP11.64□□□□□ -0.55
RFC1-203ENST00000418436 SPECC1Q5M775 1068 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 CDCA2Q69YH5 1023 aaPredicted RBP11.64□□□□□ -0.55
RFC1-203ENST00000418436 CATSPER4Q7RTX7 472 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 DAW1Q8N136 415 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 BSNDQ8WZ55 320 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 SYMPKQ92797 1274 aaKnown RBP11.64□□□□□ -0.55
RFC1-203ENST00000418436 KIFAP3Q92845 792 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 TIPINQ9BVW5 301 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 ELAC1Q9H777 363 aaKnown RBP11.64□□□□□ -0.55
RFC1-203ENST00000418436 AGPAT5Q9NUQ2 364 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 KCND2Q9NZV8 630 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 RCOR1Q9UKL0 485 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 CFAP45Q9UL16 551 aa11.64□□□□□ -0.55
RFC1-203ENST00000418436 A0A0U1RQF3 1178 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 LINC01553A4QN01 128 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 STAG3L1P0CL83 205 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 NAMPTP43490 491 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 KCNC4Q03721 635 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 GRIN2CQ14957 1233 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 PPP2R5AQ15172 486 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 AMHR2Q16671 573 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 FOXD4L6Q3SYB3 417 aaPredicted RBP11.63□□□□□ -0.55
RFC1-203ENST00000418436 ARSHQ5FYA8 562 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 AXDND1Q5T1B0 1012 aaPredicted RBP11.63□□□□□ -0.55
RFC1-203ENST00000418436 PPP2R2DQ66LE6 453 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 FOXD4L3Q6VB84 417 aaPredicted RBP11.63□□□□□ -0.55
RFC1-203ENST00000418436 KCNG4Q8TDN1 519 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 RAD54LQ92698 747 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 GUCD1Q96NT3 240 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 YME1L1Q96TA2 773 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 FZD8Q9H461 694 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 POLD4Q9HCU8 107 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 TMEM161AQ9NX61 479 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 DACT1Q9NYF0 836 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 DAXXQ9UER7 740 aaPredicted RBP11.63□□□□□ -0.55
RFC1-203ENST00000418436 PCDHB7Q9Y5E2 793 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 KIAA1671Q9BY89 1806 aa11.63□□□□□ -0.55
RFC1-203ENST00000418436 CHD7Q9P2D1 2997 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 LRRIQ4A6NIV6 560 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 TSPAN1O60635 241 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 CUTAO60888 179 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 ZNF623O75123 536 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 HIP1RO75146 1068 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 EOMESO95936 686 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 AXLP30530 894 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 ERVK-21P61565 698 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 FAM187BQ17R55 369 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 NAALADL2Q58DX5 795 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 ZNF598Q86UK7 904 aaKnown RBP11.62□□□□□ -0.55
RFC1-203ENST00000418436 ECHDC2Q86YB7 292 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 LARP4BQ92615 738 aaKnown RBP11.62□□□□□ -0.55
RFC1-203ENST00000418436 DRC1Q96MC2 740 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 FAM161BQ96MY7 647 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 CDX2Q99626 313 aaPredicted RBP11.62□□□□□ -0.55
RFC1-203ENST00000418436 NTPCRQ9BSD7 190 aaKnown RBP11.62□□□□□ -0.55
RFC1-203ENST00000418436 CCDC113Q9H0I3 377 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 C2orf40Q9H1Z8 148 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 TMEM134Q9H6X4 195 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 C17orf75Q9HAS0 396 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 STK17AQ9UEE5 414 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 CCDC39Q9UFE4 941 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 LRFN2Q9ULH4 789 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 PIN4Q9Y237 131 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms