RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 NPTXRO95502 500 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 FSHBP01225 129 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 KCNA6P17658 529 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 CR2P20023 1033 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 IGFALSP35858 605 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 MRE11P49959 708 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 MOGSQ13724 837 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 PCOLCEQ15113 449 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 STILQ15468 1287 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 SPDYAQ5MJ70 313 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 CATSPEREQ5SY80 951 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 GRAMD4Q6IC98 578 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 OR14K1Q8NGZ2 314 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 DLG3Q92796 817 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 CFAP53Q96M91 514 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 WWC2-AS2Q96NR7 200 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 ADOQ96SZ5 270 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 Q9UFV3 132 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 PUF60Q9UHX1 559 aaKnown RBP4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 ZBED9Q6R2W3 1325 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 LMTK3Q96Q04 1460 aa4.94□□□□□ -1.62
HMGB3P20-201ENST00000417997 B4E1Z4 1266 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 ARHGAP6O43182 974 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 KCNQ2O43526 872 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 GLRX3O76003 335 aaKnown RBP4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 TNNT2P45379 298 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 STAT5BP51692 787 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 KIF11P52732 1056 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 EIF4HQ15056 248 aaKnown RBP4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 AGBL4Q5VU57 503 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 KANK2Q63ZY3 851 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 ZCCHC8Q6NZY4 707 aaKnown RBP4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 USP30Q70CQ3 517 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 FUKQ8N0W3 1084 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 SH3TC2Q8TF17 1288 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 CLUHP3Q96NS8 147 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 PCIF1Q9H4Z3 704 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 CABP5Q9NP86 173 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 ASB1Q9Y576 335 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 TNPO3Q9Y5L0 923 aaKnown RBP4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 LTN1O94822 1766 aa4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 XIRP1Q702N8 1843 aaKnown RBP4.93□□□□□ -1.62
HMGB3P20-201ENST00000417997 LRRC7Q96NW7 1537 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 POLR3AO14802 1390 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 INSRP06213 1382 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 MARF1Q9Y4F3 1742 aaKnown RBP4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 USP6P35125 1406 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 CPSF1Q10570 1443 aaKnown RBP4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 PPP1R12AO14974 1030 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 AMHP03971 560 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 ASLP04424 464 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 C6P13671 934 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 COMTP21964 271 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 APEX1P27695 318 aaKnown RBP4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 SDHAP31040 664 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 MAP3K12Q12852 859 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 SQSTM1Q13501 440 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 ZNF460Q14592 562 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 PRKD1Q15139 912 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 TBR1Q16650 682 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 ARHGAP44Q17R89 818 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 PIK3R6Q5UE93 754 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 NPM2Q86SE8 214 aaKnown RBP4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 CHST14Q8NCH0 376 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 PNISRQ8TF01 805 aaKnown RBP4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 DRC1Q96MC2 740 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 PLA2G12BQ9BX93 195 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 OR10A2Q9H208 303 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 VPS11Q9H270 941 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 SEMA4AQ9H3S1 761 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 KANSL2Q9H9L4 492 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 MAGEL2Q9UJ55 1249 aa4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 CDK12Q9NYV4 1490 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P20-201ENST00000417997 PTPDC1A2A3K4 754 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 GOLGA6L22H0YM25 854 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 H7C1D1 291 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 DNAJC8O75937 253 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 RAD17O75943 681 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 ASMTLO95671 621 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 ZBTB48P10074 688 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 FLT3P36888 993 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 SLC6A3Q01959 620 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 R3HDM1Q15032 1099 aaKnown RBP4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 CCDC144BQ3MJ40 725 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 FNDC3BQ53EP0 1204 aaKnown RBP4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 TMEM200BQ69YZ2 307 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 CC2D1AQ6P1N0 951 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 UBE2R2Q712K3 238 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 NGDNQ8NEJ9 315 aaKnown RBP4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 E2F7Q96AV8 911 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 COG3Q96JB2 828 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 ZNF341Q9BYN7 854 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 TRPM3Q9HCF6 1732 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 ACEP12821 1306 aa4.91□□□□□ -1.62
HMGB3P20-201ENST00000417997 COL3A1P02461 1466 aaPredicted RBP4.9□□□□□ -1.62
HMGB3P20-201ENST00000417997 JMJD7P0C870 316 aa4.9□□□□□ -1.63
HMGB3P20-201ENST00000417997 ACO1P21399 889 aaKnown RBP4.9□□□□□ -1.63
HMGB3P20-201ENST00000417997 TACR2P21452 398 aa4.9□□□□□ -1.63
HMGB3P20-201ENST00000417997 HSPA2P54652 639 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms