RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 STX1AQ16623 288 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 TPD52L1Q16890 204 aaPredicted RBP9.3□□□□□ -0.92
TRIM48-201ENST00000417545 TRIM71Q2Q1W2 868 aaKnown RBP9.3□□□□□ -0.92
TRIM48-201ENST00000417545 FAM26DQ5JW98 314 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 CDCA2Q69YH5 1023 aaPredicted RBP9.3□□□□□ -0.92
TRIM48-201ENST00000417545 KLHL10Q6JEL2 608 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 HS2ST1Q7LGA3 356 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 NELFCDQ8IXH7 590 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 RPUSD2Q8IZ73 545 aaKnown RBP9.3□□□□□ -0.92
TRIM48-201ENST00000417545 SEPT8Q92599 483 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 HPS3Q969F9 1004 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 PRIMPOLQ96LW4 560 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 CTAGE1Q96RT6 745 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 ANP32EQ9BTT0 268 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 MRPL4Q9BYD3 311 aaKnown RBP9.3□□□□□ -0.92
TRIM48-201ENST00000417545 NFKBIZQ9BYH8 718 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 IFIH1Q9BYX4 1025 aaKnown RBP9.3□□□□□ -0.92
TRIM48-201ENST00000417545 ADAMTS10Q9H324 1103 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 TMEM134Q9H6X4 195 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 METRNQ9UJH8 293 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 TBX21Q9UL17 535 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 GDAQ9Y2T3 454 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 UMODL1Q5DID0 1318 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 SCN5AQ14524 2016 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 SYCE3A1L190 88 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 N4BP3O15049 544 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 CALUO43852 315 aaPredicted RBP9.29□□□□□ -0.92
TRIM48-201ENST00000417545 CSDE1O75534 798 aaKnown RBP9.29□□□□□ -0.92
TRIM48-201ENST00000417545 PRPF6O94906 941 aaKnown RBP9.29□□□□□ -0.92
TRIM48-201ENST00000417545 CHRNA1P02708 482 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 IQCF3P0C7M6 154 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 HARSP12081 509 aaKnown RBP9.29□□□□□ -0.92
TRIM48-201ENST00000417545 CD52P31358 61 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 MBTD1Q05BQ5 628 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 ZC2HC1CQ53FD0 456 aaPredicted RBP9.29□□□□□ -0.92
TRIM48-201ENST00000417545 FBXO47Q5MNV8 452 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 TWF2Q6IBS0 349 aaKnown RBP9.29□□□□□ -0.92
TRIM48-201ENST00000417545 MFSD5Q6N075 450 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 NOTUMQ6P988 496 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 ZNF720Q7Z2F6 126 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 SMYD4Q8IYR2 804 aaPredicted RBP9.29□□□□□ -0.92
TRIM48-201ENST00000417545 HACE1Q8IYU2 909 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 TMEM161BQ8NDZ6 487 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 APBB2Q92870 758 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 NAT10Q9H0A0 1025 aaKnown RBP9.29□□□□□ -0.92
TRIM48-201ENST00000417545 CDHR5Q9HBB8 845 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 ANO10Q9NW15 660 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 ARHGAP28Q9P2N2 729 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 ANKFY1Q9P2R3 1169 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 TBX20Q9UMR3 447 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 ST3GAL5Q9UNP4 418 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 MAPK8IP1Q9UQF2 711 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 NOC2LQ9Y3T9 749 aaKnown RBP9.29□□□□□ -0.92
TRIM48-201ENST00000417545 SQORQ9Y6N5 450 aa9.29□□□□□ -0.92
TRIM48-201ENST00000417545 ADGRA3Q8IWK6 1321 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 BICDL2A1A5D9 508 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 TRIM43BA6NCK2 446 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 ZBBXA8MT70 800 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 ACKR2O00590 384 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 PFKMP08237 780 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 AXLP30530 894 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 KCNJ6P48051 423 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 CASP5P51878 434 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 NLRP12P59046 1061 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 GTF2BQ00403 316 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 STK4Q13043 487 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 MORC3Q14149 939 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 HSP90AA2PQ14568 343 aaPredicted RBP9.28□□□□□ -0.92
TRIM48-201ENST00000417545 LPIN1Q14693 890 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 ZNF568Q3ZCX4 644 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 ATF7IP2Q5U623 682 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 ARMCX5Q6P1M9 558 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 FAM228AQ86W67 206 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 IFNLR1Q8IU57 520 aaPredicted RBP9.28□□□□□ -0.92
TRIM48-201ENST00000417545 MLKLQ8NB16 471 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 GOLGA5Q8TBA6 731 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 TRIM43Q96BQ3 446 aaPredicted RBP9.28□□□□□ -0.92
TRIM48-201ENST00000417545 CPB2Q96IY4 423 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 NTPCRQ9BSD7 190 aaKnown RBP9.28□□□□□ -0.92
TRIM48-201ENST00000417545 FTHL17Q9BXU8 183 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 GBP3Q9H0R5 595 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 WNT8AQ9H1J5 351 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 MTIF3Q9H2K0 278 aaKnown RBP9.28□□□□□ -0.92
TRIM48-201ENST00000417545 ST6GALNAC4Q9H4F1 302 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 IFT122Q9HBG6 1241 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 PADI3Q9ULW8 664 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 CTNND2Q9UQB3 1225 aa9.28□□□□□ -0.92
TRIM48-201ENST00000417545 CNTNAP2Q9UHC6 1331 aa9.27□□□□□ -0.93
TRIM48-201ENST00000417545 LTBP2Q14767 1821 aa9.27□□□□□ -0.93
TRIM48-201ENST00000417545 CLDN3O15551 220 aa9.27□□□□□ -0.93
TRIM48-201ENST00000417545 B4GALT5O43286 388 aa9.27□□□□□ -0.93
TRIM48-201ENST00000417545 TSPAN1O60635 241 aa9.27□□□□□ -0.93
TRIM48-201ENST00000417545 SKIP12755 728 aa9.27□□□□□ -0.93
TRIM48-201ENST00000417545 CSF2RAP15509 400 aa9.27□□□□□ -0.93
TRIM48-201ENST00000417545 SARSP49591 514 aaKnown RBP9.27□□□□□ -0.93
TRIM48-201ENST00000417545 TYRO3Q06418 890 aa9.27□□□□□ -0.93
TRIM48-201ENST00000417545 PAK1Q13153 545 aa9.27□□□□□ -0.93
TRIM48-201ENST00000417545 IKBKEQ14164 716 aa9.27□□□□□ -0.93
TRIM48-201ENST00000417545 KNOP1Q1ED39 458 aaKnown RBP9.27□□□□□ -0.93
TRIM48-201ENST00000417545 ZSCAN23Q3MJ62 389 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms