RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 KANSL3Q9P2N6 904 aa19.57■□□□□ 0.72
PDLIM2-208ENST00000416159 FAM86C2PA6NEL3 165 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 C2orf71A6NGG8 1288 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 POTEMA6NI47 508 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 PRR33A8MZF0 331 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 GALTP07902 379 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 ARL2P36404 184 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 TECP42680 631 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 RBM10P98175 930 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 UBXN11Q5T124 520 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 ANKRD54Q6NXT1 300 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 DDX53Q86TM3 631 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 FBXO18Q8NFZ0 1043 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 PIGOQ8TEQ8 1089 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 CASP10Q92851 521 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 CCDC51Q96ER9 411 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 IGSF21Q96ID5 467 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 KIF2CQ99661 725 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 RSAD1Q9HA92 442 aa19.56■□□□□ 0.72
PDLIM2-208ENST00000416159 INO80B-WBP1J3KQ70 363 aa19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 CXCL14O95715 111 aa19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 SPATA31C1P0DKV0 1188 aa19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 HOXB8P17481 243 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 NCLP19338 710 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 RBM25P49756 843 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 GIT2Q14161 759 aa19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 ZNF174Q15697 407 aa19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 C8orf34Q49A92 452 aa19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 RNF135Q8IUD6 432 aa19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 VPS52Q8N1B4 723 aa19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 ASAP3Q8TDY4 903 aa19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 SUSD6Q92537 303 aa19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 POLR3CQ9BUI4 534 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 PHF7Q9BWX1 381 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 UBN1Q9NPG3 1134 aa19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 HCN4Q9Y3Q4 1203 aa19.55■□□□□ 0.72
PDLIM2-208ENST00000416159 TSPAN1O60635 241 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 OR52Z1P0C646 297 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 ITGA4P13612 1032 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 TRAPPC10P48553 1259 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 GNL2Q13823 731 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 CAPSQ13938 189 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 LLGL2Q6P1M3 1020 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 NOTUMQ6P988 496 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 CATSPER3Q86XQ3 398 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 ERMNQ8TAM6 284 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 FAM193BQ96PV7 902 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 NACC1Q96RE7 527 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 TMEM175Q9BSA9 504 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 NFKBIZQ9BYH8 718 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 GBP3Q9H0R5 595 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 ZBP1Q9H171 429 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 S1PR5Q9H228 398 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 STK39Q9UEW8 545 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 DBR1Q9UK59 544 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 ARIH1Q9Y4X5 557 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 IRAK3Q9Y616 596 aa19.54■□□□□ 0.72
PDLIM2-208ENST00000416159 A0A087WWV3 80 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 LOC730098B7Z3J9 87 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 USO1O60763 962 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 CLASP2O75122 1294 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 ALDH2P05091 517 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 CTSAP10619 480 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 GLRA2P23416 452 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 CA8P35219 290 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 SLC11A1P49279 550 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 CBX2Q14781 532 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 HERC4Q5GLZ8 1057 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 TTC38Q5R3I4 469 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 SYCE2Q6PIF2 218 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 TMEM173Q86WV6 379 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 ZNF280BQ86YH2 543 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 TMEM87AQ8NBN3 555 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 SMG8Q8ND04 991 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 CSRNP2Q9H175 543 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 POLR3FQ9H1D9 316 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 DNAJB4Q9UDY4 337 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 NOL7Q9UMY1 257 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 IPPQ9Y573 584 aa19.53■□□□□ 0.72
PDLIM2-208ENST00000416159 MED24O75448 989 aa19.52■□□□□ 0.72
PDLIM2-208ENST00000416159 DDHD2O94830 711 aa19.52■□□□□ 0.72
PDLIM2-208ENST00000416159 RPA1P27694 616 aa19.52■□□□□ 0.72
PDLIM2-208ENST00000416159 MBTD1Q05BQ5 628 aa19.52■□□□□ 0.72
PDLIM2-208ENST00000416159 TPRNQ4KMQ1 711 aa19.52■□□□□ 0.72
PDLIM2-208ENST00000416159 NOSTRINQ8IVI9 506 aa19.52■□□□□ 0.72
PDLIM2-208ENST00000416159 MCPH1Q8NEM0 835 aa19.52■□□□□ 0.72
PDLIM2-208ENST00000416159 CPB2Q96IY4 423 aa19.52■□□□□ 0.72
PDLIM2-208ENST00000416159 EIF2AQ9BY44 585 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-208ENST00000416159 FAN1Q9Y2M0 1017 aa19.52■□□□□ 0.72
PDLIM2-208ENST00000416159 HCFC2Q9Y5Z7 792 aa19.52■□□□□ 0.72
PDLIM2-208ENST00000416159 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-208ENST00000416159 MUTP22033 750 aa19.51■□□□□ 0.71
PDLIM2-208ENST00000416159 AMHR2Q16671 573 aa19.51■□□□□ 0.71
PDLIM2-208ENST00000416159 HACE1Q8IYU2 909 aa19.51■□□□□ 0.71
PDLIM2-208ENST00000416159 BCL7CQ8WUZ0 217 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-208ENST00000416159 MUTYHQ9UIF7 546 aa19.51■□□□□ 0.71
PDLIM2-208ENST00000416159 INPPL1O15357 1258 aa19.5■□□□□ 0.71
PDLIM2-208ENST00000416159 B4GALT3O60512 393 aa19.5■□□□□ 0.71
PDLIM2-208ENST00000416159 POMCP01189 267 aa19.5■□□□□ 0.71
PDLIM2-208ENST00000416159 ARF4P18085 180 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms