RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 GPR162Q16538 588 aa4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 TIGD7Q6NT04 549 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 ARMC6Q6NXE6 501 aa4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 OVCH1Q7RTY7 1134 aa4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 ZNF366Q8N895 744 aa4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 ZNF384Q8TF68 577 aa4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 FOXRED1Q96CU9 486 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 LRFN3Q9BTN0 628 aa4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 PFDN2Q9UHV9 154 aa4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 EPN1Q9Y6I3 576 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 PIPSLA2A3N6 862 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 UNCXA6NJT0 531 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 AHRRA9YTQ3 701 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 RASGRP1O95267 797 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 ESRRBO95718 433 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 HNRNPLP14866 589 aaKnown RBP eCLIP4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 TYRP1P17643 537 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 DDX6P26196 483 aaKnown RBP eCLIP4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 MGAT1P26572 445 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 FAM214AQ32MH5 1076 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 TM4SF20Q53R12 229 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 CPEB3Q8NE35 698 aaKnown RBP4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 LINC00476Q8WZB0 136 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 OSBPL6Q9BZF3 934 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 SPON1Q9HCB6 807 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 SYBUQ9NX95 663 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 MSRB2Q9Y3D2 182 aa4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 TNPO3Q9Y5L0 923 aaKnown RBP4.57□□□□□ -1.68
TRAPPC13-203ENST00000415825 CCDC163A0A0D9SF12 145 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 B4E1Z4 1266 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 STC2O76061 302 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 KIF11P52732 1056 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 ZNF174Q15697 407 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 TMEM177Q53S58 311 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 PIK3R6Q5UE93 754 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 FOXB2Q5VYV0 432 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 DDX53Q86TM3 631 aaKnown RBP4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 GSTCDQ8NEC7 633 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 OR52N2Q8NGI0 321 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 IL17RAQ96F46 866 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 HIST1H2AHQ96KK5 128 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 EXOC2Q96KP1 924 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 HIST1H2AJQ99878 128 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 SLC52A2Q9HAB3 445 aa4.56□□□□□ -1.68
TRAPPC13-203ENST00000415825 CCDC85CA6NKD9 419 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 IGLV2-14P01704 120 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 FAM153BP0C7A2 387 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 PTH2RP49190 550 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 ZNF81P51508 661 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 FAM189BP81408 668 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 ADCY1Q08828 1119 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 BEAN1Q3B7T3 259 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 SPDYE7PQ495Y7 208 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 ARHGEF25Q86VW2 580 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 SRRM1Q8IYB3 904 aaKnown RBP4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 SLC44A3Q8N4M1 653 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 LILRA3Q8N6C8 439 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 IGSF22Q8N9C0 903 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 KMT5AQ9NQR1 393 aa4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 USP36Q9P275 1121 aaKnown RBP4.55□□□□□ -1.68
TRAPPC13-203ENST00000415825 DNAJC9-AS1A6NH13 148 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 UNC119BA6NIH7 251 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 ALDH1A2O94788 518 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 APOL3O95236 402 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 RBP3P10745 1247 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 ITGAMP11215 1152 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 PLA2G5P39877 138 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 RANGAP1P46060 587 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 RNASE9P60153 205 aaKnown RBP4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 TRIM61Q5EBN2 209 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 DOK3Q7L591 496 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 OTOP1Q7RTM1 612 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 BRAPQ7Z569 592 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 C7orf31Q8N865 590 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 HEPHQ9BQS7 1158 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 POGKQ9P215 609 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 LRIT1Q9P2V4 623 aa4.54□□□□□ -1.68
TRAPPC13-203ENST00000415825 KDM2BQ8NHM5 1336 aa4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 ZNF185O15231 689 aa4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 FOSP01100 380 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 ZFP36P26651 326 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 GZMKP49863 264 aa4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 NHLH2Q02577 135 aa4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 DUSP2Q05923 314 aa4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 ADCY2Q08462 1091 aa4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 FOXI1Q12951 378 aa4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 KIAA1614Q5VZ46 1190 aa4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 FSTL4Q6MZW2 842 aa4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 NOL10Q9BSC4 688 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 HAPLN2Q9GZV7 340 aa4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 PRDM13Q9H4Q3 707 aa4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 SIRPGQ9P1W8 387 aa4.53□□□□□ -1.68
TRAPPC13-203ENST00000415825 TCRBV16S1A1N1A0A5B0 115 aa4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 H7C1D1 291 aa4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 ZBTB48P10074 688 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 CASRP41180 1078 aa4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 NHLH1Q02575 133 aa4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 SRSF4Q08170 494 aaKnown RBP4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 EPHA7Q15375 998 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms