RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 RAB27AP51159 221 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 RBM10P98175 930 aaKnown RBP11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 KRT17Q04695 432 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 ADAM15Q13444 863 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 CUL4AQ13619 759 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 AMHR2Q16671 573 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 TMEM132AQ24JP5 1023 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 TMC7Q7Z402 723 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 MRPL10Q7Z7H8 261 aaKnown RBP11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 IGSF22Q8N9C0 903 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 SMG8Q8ND04 991 aaKnown RBP11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 MCPH1Q8NEM0 835 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 MRPS27Q92552 414 aaKnown RBP11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 TCF25Q9BQ70 676 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 KIFC3Q9BVG8 833 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 TRAIPQ9BWF2 469 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 RAB34Q9BZG1 259 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 RSAD1Q9HA92 442 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 ENTPD7Q9NQZ7 604 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 TBC1D13Q9NVG8 400 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 DNAJB4Q9UDY4 337 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 DNM3Q9UQ16 869 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 IPPQ9Y573 584 aa11.28□□□□□ -0.6
NCKIPSD-202ENST00000413374 COL4A4P53420 1690 aaPredicted RBP11.27□□□□□ -0.6
NCKIPSD-202ENST00000413374 TTLL13PA6NNM8 815 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 HIDE1A8MVS5 230 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 LAD1O00515 517 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 DDHD2O94830 711 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 NCLP19338 710 aaKnown RBP11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 AKAP5P24588 427 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 AXLP30530 894 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 NDUFV1P49821 464 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 ATP2C1P98194 919 aaPredicted RBP11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 PLCB3Q01970 1234 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 UBE3AQ05086 875 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 POU5F1BQ06416 359 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 CSPP1Q1MSJ5 1256 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 LLGL2Q6P1M3 1020 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 NOTUMQ6P988 496 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 KCNK18Q7Z418 384 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 TMEM173Q86WV6 379 aaPredicted RBP11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 ZBTB8OSQ8IWT0 167 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 SLC39A11Q8N1S5 342 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 DEPTORQ8TB45 409 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 URGCPQ8TCY9 931 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 AUTS2Q8WXX7 1259 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 PPP2R3CQ969Q6 453 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 FAM193BQ96PV7 902 aaPredicted RBP11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 MMTAG2Q9BU76 263 aaKnown RBP11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 MRPL9Q9BYD2 267 aaKnown RBP11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 TRIM6Q9C030 488 aaPredicted RBP11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 CSRNP2Q9H175 543 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 MIOSQ9NXC5 875 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 KLK14Q9P0G3 267 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 PARP2Q9UGN5 583 aa11.27□□□□□ -0.61
NCKIPSD-202ENST00000413374 GRXCR2A6NFK2 248 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 SFI1A8K8P3 1242 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 FSCN2O14926 492 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 NCK2O43639 380 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 B4GALT3O60512 393 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 TBX10O75333 385 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 EYA4O95677 639 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 CXCL14O95715 111 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 GALTP07902 379 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 MLH1P40692 756 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 PRPHP41219 470 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 SLC11A1P49279 550 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 RAD51AP2Q09MP3 1159 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 CTC1Q2NKJ3 1217 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 FAM173BQ6P4H8 233 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 BCL7CQ8WUZ0 217 aaPredicted RBP11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 ZFP42Q96MM3 310 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 PNMA5Q96PV4 448 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 GAD1Q99259 594 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 APOL5Q9BWW9 433 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 NXF3Q9H4D5 531 aaKnown RBP11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 CD320Q9NPF0 282 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 BARX2Q9UMQ3 279 aaPredicted RBP11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 STK24Q9Y6E0 443 aa11.26□□□□□ -0.61
NCKIPSD-202ENST00000413374 A0A1B0GUA9 196 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 ARL5CA6NH57 179 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 CCDC169A6NNP5 214 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 NRP1O14786 923 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 HIP1RO75146 1068 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 ALDH2P05091 517 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 EDN1P05305 212 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 PRKCBP05771 671 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 MUTP22033 750 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 SSTR3P32745 418 aaPredicted RBP11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 PPM1AP35813 382 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 NAMPTP43490 491 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 OR1G1P47890 313 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 SCNN1GP51170 649 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 PEX3P56589 373 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 CEBPZQ03701 1054 aaKnown RBP11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 GRIN1Q05586 938 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 PRPF4BQ13523 1007 aaKnown RBP11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 DHX8Q14562 1220 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms