RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 ERCC5P28715 1186 aaPredicted RBP28.48■■■□□ 2.15
RHBDD3-203ENST00000413137 MAPK6Q16659 721 aa28.48■■■□□ 2.15
RHBDD3-203ENST00000413137 ZCWPW2Q504Y3 356 aa28.48■■■□□ 2.15
RHBDD3-203ENST00000413137 TTI2Q6NXR4 508 aa28.48■■■□□ 2.15
RHBDD3-203ENST00000413137 SRGAP1Q7Z6B7 1085 aa28.48■■■□□ 2.15
RHBDD3-203ENST00000413137 DHX40Q8IX18 779 aaKnown RBP28.48■■■□□ 2.15
RHBDD3-203ENST00000413137 SYCP3Q8IZU3 236 aa28.48■■■□□ 2.15
RHBDD3-203ENST00000413137 RWDD2AQ9UIY3 292 aa28.48■■■□□ 2.15
RHBDD3-203ENST00000413137 UMODL1Q5DID0 1318 aa28.47■■■□□ 2.15
RHBDD3-203ENST00000413137 M0QZ92 97 aa28.47■■■□□ 2.15
RHBDD3-203ENST00000413137 TLR3O15455 904 aaKnown RBP28.47■■■□□ 2.15
RHBDD3-203ENST00000413137 STRN3Q13033 797 aa28.47■■■□□ 2.15
RHBDD3-203ENST00000413137 IQCB1Q15051 598 aa28.47■■■□□ 2.15
RHBDD3-203ENST00000413137 FAM26DQ5JW98 314 aa28.47■■■□□ 2.15
RHBDD3-203ENST00000413137 RNF214Q8ND24 703 aa28.47■■■□□ 2.15
RHBDD3-203ENST00000413137 DUSP9Q99956 384 aaKnown RBP28.47■■■□□ 2.15
RHBDD3-203ENST00000413137 TARS2Q9BW92 718 aaKnown RBP28.47■■■□□ 2.15
RHBDD3-203ENST00000413137 NOC2LQ9Y3T9 749 aaKnown RBP28.47■■■□□ 2.15
RHBDD3-203ENST00000413137 KIF20AO95235 890 aa28.46■■■□□ 2.15
RHBDD3-203ENST00000413137 RPLP2P05387 115 aaKnown RBP28.46■■■□□ 2.15
RHBDD3-203ENST00000413137 PPP1R2P41236 205 aa28.46■■■□□ 2.15
RHBDD3-203ENST00000413137 AOPEPQ8N6M6 819 aa28.46■■■□□ 2.15
RHBDD3-203ENST00000413137 EEF2KMTQ96G04 330 aa28.46■■■□□ 2.15
RHBDD3-203ENST00000413137 NAT10Q9H0A0 1025 aaKnown RBP28.46■■■□□ 2.15
RHBDD3-203ENST00000413137 GBP3Q9H0R5 595 aa28.46■■■□□ 2.15
RHBDD3-203ENST00000413137 RBSNQ9H1K0 784 aa28.46■■■□□ 2.15
RHBDD3-203ENST00000413137 TMEM206Q9H813 350 aa28.46■■■□□ 2.15
RHBDD3-203ENST00000413137 ACKR2O00590 384 aa28.45■■■□□ 2.15
RHBDD3-203ENST00000413137 RBL2Q08999 1139 aa28.45■■■□□ 2.15
RHBDD3-203ENST00000413137 MBTPS1Q14703 1052 aa28.45■■■□□ 2.15
RHBDD3-203ENST00000413137 NCAPHQ15003 741 aa28.45■■■□□ 2.15
RHBDD3-203ENST00000413137 CT47A1Q5JQC4 288 aaPredicted RBP28.45■■■□□ 2.15
RHBDD3-203ENST00000413137 LUZP1Q86V48 1076 aa28.45■■■□□ 2.15
RHBDD3-203ENST00000413137 BPIFA3Q9BQP9 254 aa28.45■■■□□ 2.15
RHBDD3-203ENST00000413137 NOC4LQ9BVI4 516 aaKnown RBP28.45■■■□□ 2.15
RHBDD3-203ENST00000413137 PCDH10Q9P2E7 1040 aa28.45■■■□□ 2.15
RHBDD3-203ENST00000413137 SIP14410 1827 aa28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 CLIC2O15247 247 aa28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 SCP2P22307 547 aa28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 FAM187BQ17R55 369 aa28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 ZNF710Q8N1W2 664 aa28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 CAGE1Q8TC20 777 aa28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 BICD1Q96G01 975 aa28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 ZBTB45Q96K62 511 aaPredicted RBP28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 AGO3Q9H9G7 860 aaKnown RBP28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 AGPAT3Q9NRZ7 376 aa28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 TYW1Q9NV66 732 aaKnown RBP28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 PRMT7Q9NVM4 692 aaPredicted RBP28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 TRAF3IP3Q9Y228 551 aa28.45■■■□□ 2.14
RHBDD3-203ENST00000413137 PDXKO00764 312 aa28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 HNRNPDLO14979 420 aaKnown RBP28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 TSPAN1O60635 241 aa28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 CAND2O75155 1236 aa28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 ADSSP30520 456 aa28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 PRPF4BQ13523 1007 aaKnown RBP28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 PPP4R3CPQ6ZMV5 832 aa28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 FAM228AQ86W67 206 aa28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 CDR2LQ86X02 465 aaPredicted RBP28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 ENOX1Q8TC92 643 aaKnown RBP28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 FAM200AQ8TCP9 573 aa28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 CPB2Q96IY4 423 aa28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 ACO2Q99798 780 aaKnown RBP28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 HAPLN2Q9GZV7 340 aa28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 TBX21Q9UL17 535 aa28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 EXOC7Q9UPT5 735 aa28.44■■■□□ 2.14
RHBDD3-203ENST00000413137 PIGRP01833 764 aa28.43■■■□□ 2.14
RHBDD3-203ENST00000413137 GHRP10912 638 aa28.43■■■□□ 2.14
RHBDD3-203ENST00000413137 ABCD1P33897 745 aa28.43■■■□□ 2.14
RHBDD3-203ENST00000413137 LPIN1Q14693 890 aa28.43■■■□□ 2.14
RHBDD3-203ENST00000413137 FBXO47Q5MNV8 452 aa28.43■■■□□ 2.14
RHBDD3-203ENST00000413137 MRPL4Q9BYD3 311 aaKnown RBP28.43■■■□□ 2.14
RHBDD3-203ENST00000413137 SELPP16109 830 aa28.42■■■□□ 2.14
RHBDD3-203ENST00000413137 ARF4P18085 180 aaPredicted RBP28.42■■■□□ 2.14
RHBDD3-203ENST00000413137 HOXA11P31270 313 aaPredicted RBP28.42■■■□□ 2.14
RHBDD3-203ENST00000413137 BFSP2Q13515 415 aa28.42■■■□□ 2.14
RHBDD3-203ENST00000413137 GPNMBQ14956 572 aa28.42■■■□□ 2.14
RHBDD3-203ENST00000413137 CATSPER4Q7RTX7 472 aa28.42■■■□□ 2.14
RHBDD3-203ENST00000413137 ZSWIM2Q8NEG5 633 aa28.42■■■□□ 2.14
RHBDD3-203ENST00000413137 CBWD1Q9BRT8 395 aa28.42■■■□□ 2.14
RHBDD3-203ENST00000413137 PPP1R12CQ9BZL4 782 aa28.42■■■□□ 2.14
RHBDD3-203ENST00000413137 HIPK3Q9H422 1215 aa28.42■■■□□ 2.14
RHBDD3-203ENST00000413137 CCDC85CA6NKD9 419 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 CLTBP09497 229 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 LIG4P49917 911 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 LRRC63Q05C16 580 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 LRRC8DQ7L1W4 858 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 HSD3B7Q9H2F3 369 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 PCIF1Q9H4Z3 704 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 TMEM39AQ9NV64 488 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 CNTNAP2Q9UHC6 1331 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 BICDL2A1A5D9 508 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 ABLIM1O14639 778 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 ERLIN2O94905 339 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 CAVIN2O95810 425 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 CYP2C18P33260 490 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 MYL5Q02045 173 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 HSP90AA4PQ58FG1 418 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 ATF7IP2Q5U623 682 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 SPATA1Q5VX52 437 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 EEF1DP3Q658K8 133 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms