RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 PPP1R13LQ8WUF5 828 aa16.59■□□□□ 0.25
PUDP-202ENST00000412827 IFT74Q96LB3 600 aa16.59■□□□□ 0.25
PUDP-202ENST00000412827 SH2D3AQ9BRG2 576 aa16.59■□□□□ 0.25
PUDP-202ENST00000412827 PRDM5Q9NQX1 630 aaPredicted RBP16.59■□□□□ 0.25
PUDP-202ENST00000412827 TMEM39AQ9NV64 488 aa16.59■□□□□ 0.25
PUDP-202ENST00000412827 EXOC7Q9UPT5 735 aa16.59■□□□□ 0.25
PUDP-202ENST00000412827 PHLPP2Q6ZVD8 1323 aa16.59■□□□□ 0.25
PUDP-202ENST00000412827 KAT6AQ92794 2004 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 PARNO95453 639 aaKnown RBP16.58■□□□□ 0.24
PUDP-202ENST00000412827 MYBP10242 640 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 THPOP40225 353 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 CLCN3P51790 818 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 ZNF200P98182 395 aaPredicted RBP16.58■□□□□ 0.24
PUDP-202ENST00000412827 RBL2Q08999 1139 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 DMP1Q13316 513 aaPredicted RBP16.58■□□□□ 0.24
PUDP-202ENST00000412827 TRIM14Q14142 442 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 TFDP1Q14186 410 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 HSP90AA2PQ14568 343 aaPredicted RBP16.58■□□□□ 0.24
PUDP-202ENST00000412827 FAM102BQ5T8I3 360 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 SPECC1LQ69YQ0 1117 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 SLC9A9Q8IVB4 645 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 C12orf56Q8IXR9 622 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 LRRC71Q8N4P6 559 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 GLIS3Q8NEA6 775 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 CNOT6LQ96LI5 555 aaKnown RBP16.58■□□□□ 0.24
PUDP-202ENST00000412827 SCLT1Q96NL6 688 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 ACCSQ96QU6 501 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 CEP89Q96ST8 783 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 MKNK1Q9BUB5 465 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 GBP3Q9H0R5 595 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 HIPK3Q9H422 1215 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 METTL14Q9HCE5 456 aaKnown RBP16.58■□□□□ 0.24
PUDP-202ENST00000412827 NR2E3Q9Y5X4 410 aa16.58■□□□□ 0.24
PUDP-202ENST00000412827 SFI1A8K8P3 1242 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 LGALS16A8MUM7 142 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 SLC16A3O15427 465 aaKnown RBP16.57■□□□□ 0.24
PUDP-202ENST00000412827 ASAP2O43150 1006 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 NRDCO43847 1150 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 PRPF6O94906 941 aaKnown RBP16.57■□□□□ 0.24
PUDP-202ENST00000412827 HOXD13P35453 343 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 PBX1P40424 430 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 MTIF2P46199 727 aaKnown RBP16.57■□□□□ 0.24
PUDP-202ENST00000412827 CASP5P51878 434 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 FAAP100Q0VG06 881 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 ADAM9Q13443 819 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 HIC1Q14526 733 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 NELFCDQ8IXH7 590 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 LINC01465Q8N7H1 131 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 SPC24Q8NBT2 197 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 DPF3Q92784 378 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 TUBGCP2Q9BSJ2 902 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 FGFBP2Q9BYJ0 223 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 POLR3FQ9H1D9 316 aaPredicted RBP16.57■□□□□ 0.24
PUDP-202ENST00000412827 SUCLA2Q9P2R7 463 aaPredicted RBP16.57■□□□□ 0.24
PUDP-202ENST00000412827 TBX21Q9UL17 535 aa16.57■□□□□ 0.24
PUDP-202ENST00000412827 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.57■□□□□ 0.24
PUDP-202ENST00000412827 K7ENM7 598 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 NMT1P30419 496 aaKnown RBP16.56■□□□□ 0.24
PUDP-202ENST00000412827 MRPS6P82932 125 aaKnown RBP16.56■□□□□ 0.24
PUDP-202ENST00000412827 MAN2A1Q16706 1144 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 RUFY4Q6ZNE9 571 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 CCDC186Q7Z3E2 898 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 TMC6Q7Z403 805 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 HAUS6Q7Z4H7 955 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 FRMD5Q7Z6J6 570 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 ZNF410Q86VK4 478 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 ZSCAN30Q86W11 494 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 C7orf61Q8IZ16 206 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 DNAJB3Q8WWF6 145 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 KMT5AQ9NQR1 393 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 XPNPEP1Q9NQW7 623 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 INTS13Q9NVM9 706 aa16.56■□□□□ 0.24
PUDP-202ENST00000412827 KIAA0355O15063 1070 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 RAG1P15918 1043 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 SELPP16109 830 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 NR2F2P24468 414 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 ARL2P36404 184 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 PEX3P56589 373 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 TBX2Q13207 712 aaPredicted RBP16.55■□□□□ 0.24
PUDP-202ENST00000412827 HSP90AA4PQ58FG1 418 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 RHPN2Q8IUC4 686 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 KIAA0319LQ8IZA0 1049 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 TMEM143Q96AN5 459 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 NOC4LQ9BVI4 516 aaKnown RBP16.55■□□□□ 0.24
PUDP-202ENST00000412827 DMAC2Q9NW81 257 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 ZKSCAN5Q9Y2L8 839 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 TRPV2Q9Y5S1 764 aa16.55■□□□□ 0.24
PUDP-202ENST00000412827 MAPK13O15264 365 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 TGFB1I1O43294 461 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 CTSHP09668 335 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 CKBP12277 381 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 RFC2P35250 354 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 NAMPTP43490 491 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 PHKA2P46019 1235 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 NPTX2P47972 431 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 FKBP15Q5T1M5 1219 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 LRRC8DQ7L1W4 858 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 MAEAQ7L5Y9 396 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 SYCP3Q8IZU3 236 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms