RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ARHGAP26Q9UNA1 814 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 A0A0G2JND7 137 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 MEFVO15553 781 aaPredicted RBP11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 SLC16A1P53985 500 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 NR5A1Q13285 461 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 HLFQ16534 295 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 SH3TC2Q8TF17 1288 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 ZC3H15Q8WU90 426 aaKnown RBP11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 P2RX5Q93086 422 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 DR1Q01658 176 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 TBL3Q12788 808 aaKnown RBP11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 TMC4Q7Z404 712 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 ZNF512Q96ME7 567 aaPredicted RBP11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 HEMGNQ9BXL5 484 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 MID2Q9UJV3 735 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 PPIEQ9UNP9 301 aaKnown RBP11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 KIF24Q5T7B8 1368 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 MAN1A2O60476 641 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 SERPING1P05155 500 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 MRPL4Q9BYD3 311 aaKnown RBP11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 EMILIN3Q9NT22 766 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 ANGPTL2Q9UKU9 493 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 GRAPQ13588 217 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 PCSK7Q16549 785 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 PDIK1LQ8N165 341 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 GRAPLQ8TC17 118 aaPredicted RBP11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 MAD2L2Q9UI95 211 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 USP17L5A8MUK1 530 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 SYCP2LQ5T4T6 812 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 DTNAQ9Y4J8 743 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 SYNMO15061 1565 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 CCDC151A5D8V7 595 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 IQCA1LA6NCM1 817 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 PGRMC1O00264 195 aaKnown RBP11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 COPEO14579 308 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 WBP4O75554 376 aaKnown RBP11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 KRT7P08729 469 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 C6orf222P0C671 652 aaPredicted RBP11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 ACADMP11310 421 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 CHRNA3P32297 505 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 CCT5P48643 541 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 MAP3K7CLP57077 242 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 HEATR6Q6AI08 1181 aaKnown RBP11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 RGS9BPQ6ZS82 235 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 PCDHA6Q9UN73 950 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 PCDHA8Q9Y5H6 950 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 KCNA2P16389 499 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 OR1G1P47890 313 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 TRPC1P48995 793 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 ZNF658Q5TYW1 1059 aaPredicted RBP11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 NHEJ1Q9H9Q4 299 aaPredicted RBP11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 CMA1P23946 247 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 HMOX2P30519 316 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 GNA15P30679 374 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 SLC8A1P32418 973 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 CSE1LP55060 971 aaKnown RBP11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 GPSM2P81274 684 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 TEX9Q8N6V9 391 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 TRIML2Q8N7C3 387 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 OR9Q1Q8NGQ5 310 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 TRIM62Q9BVG3 475 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 RPAP3Q9H6T3 665 aaPredicted RBP11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 PIH1D3Q9NQM4 214 aaKnown RBP11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 USE1Q9NZ43 259 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 MTMR6Q9Y217 621 aa11.91□□□□□ -0.5
PRPF40A-202ENST00000410080 DARSP14868 501 aaKnown RBP11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 KIZQ2M2Z5 673 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 EFHC2Q5JST6 749 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 STKLD1Q8NE28 680 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 SPATA16Q9BXB7 569 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 ZMYND12Q9H0C1 365 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 POLR3FQ9H1D9 316 aaPredicted RBP11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 DHX35Q9H5Z1 703 aaKnown RBP11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 A8MXQ7 604 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 NBPF26B4DH59 902 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 CYP2D6P10635 497 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 GFAPP14136 432 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 HPCAP84074 193 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 KRT17Q04695 432 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 MGAT5BQ3V5L5 792 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 DEPDC1Q5TB30 811 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 ANKS6Q68DC2 871 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 EML4Q9HC35 981 aaKnown RBP11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 CYP26B1Q9NR63 512 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 KRT8P05787 483 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 CARSP49589 748 aaKnown RBP11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 PDAP1Q13442 181 aaKnown RBP11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 MAN2A1Q16706 1144 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 TBC1D9BQ66K14 1250 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 LRRC8AQ8IWT6 810 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 PGBD4Q96DM1 585 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 FAM167AQ96KS9 214 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 CUEDC2Q9H467 287 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 ATP9BO43861 1147 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 LRG1P02750 347 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 MAP2K2P36507 400 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 ZSCAN26Q16670 478 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 LRRC8EQ6NSJ5 796 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 TM6SF1Q9BZW5 370 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms