RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TBX10O75333 385 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 IL9P15248 144 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 CYP11B2P19099 503 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 CDC25AP30304 524 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 PRPHP41219 470 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 BCAR1P56945 870 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 CUL4AQ13619 759 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 RILPL1Q5EBL4 403 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 LARP1BQ659C4 914 aaKnown RBP19.64■□□□□ 0.73
LSM5-204ENST00000409909 SLC39A11Q8N1S5 342 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 BSNDQ8WZ55 320 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 PGBD4Q96DM1 585 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 EIF2AQ9BY44 585 aaKnown RBP19.64■□□□□ 0.73
LSM5-204ENST00000409909 KIAA1024Q9UPX6 916 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 PER2O15055 1255 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 B4GALT3O60512 393 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 ARF4P18085 180 aaPredicted RBP19.63■□□□□ 0.73
LSM5-204ENST00000409909 NCLP19338 710 aaKnown RBP19.63■□□□□ 0.73
LSM5-204ENST00000409909 AXLP30530 894 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 PPM1AP35813 382 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 DTHD1Q6ZMT9 781 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 ZNF280BQ86YH2 543 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 EFHBQ8N7U6 833 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 SNX29Q8TEQ0 813 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 RSPH1Q8WYR4 309 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 PPP2R3CQ969Q6 453 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 MMTAG2Q9BU76 263 aaKnown RBP19.63■□□□□ 0.73
LSM5-204ENST00000409909 BHMT2Q9H2M3 363 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 RNF39Q9H2S5 420 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 NRDE2Q9H7Z3 1164 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 TLE6Q9H808 572 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 POLD4Q9HCU8 107 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 CD320Q9NPF0 282 aa19.63■□□□□ 0.73
LSM5-204ENST00000409909 DDX19AQ9NUU7 478 aaKnown RBP19.63■□□□□ 0.73
LSM5-204ENST00000409909 PUF60Q9UHX1 559 aaKnown RBP19.63■□□□□ 0.73
LSM5-204ENST00000409909 LRRIQ4A6NIV6 560 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 ZC3H11AO75152 810 aaKnown RBP eCLIP19.62■□□□□ 0.73
LSM5-204ENST00000409909 GLP2RO95838 553 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 ALDH7A1P49419 539 aaKnown RBP19.62■□□□□ 0.73
LSM5-204ENST00000409909 ATP2C1P98194 919 aaPredicted RBP19.62■□□□□ 0.73
LSM5-204ENST00000409909 KRT17Q04695 432 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 CLUL1Q15846 466 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 PUS10Q3MIT2 529 aaKnown RBP19.62■□□□□ 0.73
LSM5-204ENST00000409909 CDCA2Q69YH5 1023 aaPredicted RBP19.62■□□□□ 0.73
LSM5-204ENST00000409909 PDE12Q6L8Q7 609 aaKnown RBP19.62■□□□□ 0.73
LSM5-204ENST00000409909 NOTUMQ6P988 496 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 TMEM173Q86WV6 379 aaPredicted RBP19.62■□□□□ 0.73
LSM5-204ENST00000409909 CCDC51Q96ER9 411 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 RAB34Q9BZG1 259 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 CSRNP2Q9H175 543 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 RSAD1Q9HA92 442 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 CLEC1BQ9P126 229 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 DNAJB4Q9UDY4 337 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 HES2Q9Y543 173 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 IPPQ9Y573 584 aa19.62■□□□□ 0.73
LSM5-204ENST00000409909 CNTNAP2Q9UHC6 1331 aa19.61■□□□□ 0.73
LSM5-204ENST00000409909 HIDE1A8MVS5 230 aa19.61■□□□□ 0.73
LSM5-204ENST00000409909 GALTP07902 379 aa19.61■□□□□ 0.73
LSM5-204ENST00000409909 RBM10P98175 930 aaKnown RBP19.61■□□□□ 0.73
LSM5-204ENST00000409909 NCBP1Q09161 790 aaKnown RBP19.61■□□□□ 0.73
LSM5-204ENST00000409909 PLPP4Q5VZY2 271 aa19.61■□□□□ 0.73
LSM5-204ENST00000409909 CDR2LQ86X02 465 aaPredicted RBP19.61■□□□□ 0.73
LSM5-204ENST00000409909 FAM178BQ8IXR5 827 aa19.61■□□□□ 0.73
LSM5-204ENST00000409909 VN1R2Q8NFZ6 395 aa19.61■□□□□ 0.73
LSM5-204ENST00000409909 BCL7CQ8WUZ0 217 aaPredicted RBP19.61■□□□□ 0.73
LSM5-204ENST00000409909 MSLNLQ96KJ4 702 aa19.61■□□□□ 0.73
LSM5-204ENST00000409909 TCF25Q9BQ70 676 aa19.61■□□□□ 0.73
LSM5-204ENST00000409909 STK24Q9Y6E0 443 aa19.61■□□□□ 0.73
LSM5-204ENST00000409909 A0A1B0GUA9 196 aa19.6■□□□□ 0.73
LSM5-204ENST00000409909 TTLL13PA6NNM8 815 aa19.6■□□□□ 0.73
LSM5-204ENST00000409909 E9PMD0 336 aa19.6■□□□□ 0.73
LSM5-204ENST00000409909 DDHD2O94830 711 aa19.6■□□□□ 0.73
LSM5-204ENST00000409909 ITGA4P13612 1032 aa19.6■□□□□ 0.73
LSM5-204ENST00000409909 RNASELQ05823 741 aaKnown RBP19.6■□□□□ 0.73
LSM5-204ENST00000409909 DUSP6Q16828 381 aa19.6■□□□□ 0.73
LSM5-204ENST00000409909 KRT79Q5XKE5 535 aa19.6■□□□□ 0.73
LSM5-204ENST00000409909 KCNK18Q7Z418 384 aa19.6■□□□□ 0.73
LSM5-204ENST00000409909 CNNM3Q8NE01 707 aa19.6■□□□□ 0.73
LSM5-204ENST00000409909 GBP3Q9H0R5 595 aa19.6■□□□□ 0.73
LSM5-204ENST00000409909 FZD8Q9H461 694 aa19.6■□□□□ 0.73
LSM5-204ENST00000409909 ENTPD7Q9NQZ7 604 aa19.6■□□□□ 0.73
LSM5-204ENST00000409909 EYA4O95677 639 aa19.59■□□□□ 0.73
LSM5-204ENST00000409909 POMCP01189 267 aa19.59■□□□□ 0.73
LSM5-204ENST00000409909 SLC11A1P49279 550 aa19.59■□□□□ 0.73
LSM5-204ENST00000409909 NDUFV1P49821 464 aa19.59■□□□□ 0.73
LSM5-204ENST00000409909 PPP4R3CPQ6ZMV5 832 aa19.59■□□□□ 0.73
LSM5-204ENST00000409909 TMC7Q7Z402 723 aa19.59■□□□□ 0.73
LSM5-204ENST00000409909 URGCPQ8TCY9 931 aa19.59■□□□□ 0.73
LSM5-204ENST00000409909 IGSF21Q96ID5 467 aa19.59■□□□□ 0.73
LSM5-204ENST00000409909 NXF3Q9H4D5 531 aaKnown RBP19.59■□□□□ 0.73
LSM5-204ENST00000409909 NGRNQ9NPE2 291 aaKnown RBP19.59■□□□□ 0.73
LSM5-204ENST00000409909 CD207Q9UJ71 328 aa19.59■□□□□ 0.73
LSM5-204ENST00000409909 BARX2Q9UMQ3 279 aaPredicted RBP19.59■□□□□ 0.73
LSM5-204ENST00000409909 DNM3Q9UQ16 869 aa19.59■□□□□ 0.73
LSM5-204ENST00000409909 USP20Q9Y2K6 914 aa19.59■□□□□ 0.73
LSM5-204ENST00000409909 TRIOO75962 3097 aa19.58■□□□□ 0.73
LSM5-204ENST00000409909 VWA3AA6NCI4 1184 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 ARL5CA6NH57 179 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 INPPL1O15357 1258 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 MBTPS2O43462 519 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms