RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 STK24Q9Y6E0 443 aa21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 CNTNAP2Q9UHC6 1331 aa21.77■■□□□ 1.07
TSPAN4-209ENST00000409543 FSD2A1L4K1 749 aa21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 NCLP19338 710 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 CCT6AP40227 531 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 AMHR2Q16671 573 aa21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 RILPL1Q5EBL4 403 aa21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 NOTUMQ6P988 496 aa21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 PADI6Q6TGC4 694 aa21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 MAEAQ7L5Y9 396 aa21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 IGSF22Q8N9C0 903 aa21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 CDCA3Q99618 268 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 TCF25Q9BQ70 676 aa21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 NGRNQ9NPE2 291 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 GPRC5CQ9NQ84 441 aa21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 TBC1D13Q9NVG8 400 aa21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 INPP5FQ9Y2H2 1132 aa21.76■■□□□ 1.07
TSPAN4-209ENST00000409543 ARHGEF35A5YM69 484 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 H3BQV1 296 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 CYP11B2P19099 503 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 PRPHP41219 470 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 NDUFV1P49821 464 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 DUSP6Q16828 381 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 URGCPQ8TCY9 931 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 MSLNLQ96KJ4 702 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 CSRNP2Q9H175 543 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 NRDE2Q9H7Z3 1164 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 RSAD1Q9HA92 442 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 UBN1Q9NPG3 1134 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 CLEC1BQ9P126 229 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 KANSL3Q9P2N6 904 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 CD207Q9UJ71 328 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 SMC3Q9UQE7 1217 aa21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-209ENST00000409543 PER2O15055 1255 aa21.74■■□□□ 1.07
TSPAN4-209ENST00000409543 ZC3H11AO75152 810 aaKnown RBP eCLIP21.74■■□□□ 1.07
TSPAN4-209ENST00000409543 RNASELQ05823 741 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-209ENST00000409543 ECM1Q16610 540 aa21.74■■□□□ 1.07
TSPAN4-209ENST00000409543 TMC7Q7Z402 723 aa21.74■■□□□ 1.07
TSPAN4-209ENST00000409543 SMG8Q8ND04 991 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-209ENST00000409543 CPB2Q96IY4 423 aa21.74■■□□□ 1.07
TSPAN4-209ENST00000409543 CD320Q9NPF0 282 aa21.74■■□□□ 1.07
TSPAN4-209ENST00000409543 ENTPD7Q9NQZ7 604 aa21.74■■□□□ 1.07
TSPAN4-209ENST00000409543 PRKAG3Q9UGI9 489 aa21.74■■□□□ 1.07
TSPAN4-209ENST00000409543 LRRIQ4A6NIV6 560 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 NT5C1B-RDH14C9J2C7 533 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 MBTPS2O43462 519 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 GLP2RO95838 553 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 GALTP07902 379 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 ITGA4P13612 1032 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 ARF4P18085 180 aaPredicted RBP21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 SMAD4Q13485 552 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 CLUL1Q15846 466 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 IL17AQ16552 155 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 PLPP4Q5VZY2 271 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 DTHD1Q6ZMT9 781 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 GJD3Q8N144 294 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 SNX29Q8TEQ0 813 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 TMEM169Q96HH4 297 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 EIF2AQ9BY44 585 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 KIAA1024Q9UPX6 916 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 IPPQ9Y573 584 aa21.73■■□□□ 1.07
TSPAN4-209ENST00000409543 EYA4O95677 639 aa21.72■■□□□ 1.07
TSPAN4-209ENST00000409543 AFF1P51825 1210 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-209ENST00000409543 COASYQ13057 564 aa21.72■■□□□ 1.07
TSPAN4-209ENST00000409543 SMAD2Q15796 467 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-209ENST00000409543 CDCA2Q69YH5 1023 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-209ENST00000409543 PPP4R3CPQ6ZMV5 832 aa21.72■■□□□ 1.07
TSPAN4-209ENST00000409543 MRPL43Q8N983 215 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-209ENST00000409543 BHMT2Q9H2M3 363 aa21.72■■□□□ 1.07
TSPAN4-209ENST00000409543 DDX19AQ9NUU7 478 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-209ENST00000409543 A0A1B0GUA9 196 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 HIDE1A8MVS5 230 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 INPPL1O15357 1258 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 B4GALT5O43286 388 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 SMC1AQ14683 1233 aaKnown RBP21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 KRT79Q5XKE5 535 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 LARP1BQ659C4 914 aaKnown RBP21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 TMEM184AQ6ZMB5 413 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 TMEM173Q86WV6 379 aaPredicted RBP21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 ZNF280BQ86YH2 543 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 ZBTB8OSQ8IWT0 167 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 IGSF21Q96ID5 467 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 PRIMPOLQ96LW4 560 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 TMEM175Q9BSA9 504 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 GBP3Q9H0R5 595 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 C2orf40Q9H1Z8 148 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 FZD8Q9H461 694 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 PRMT7Q9NVM4 692 aaPredicted RBP21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 DNAJB4Q9UDY4 337 aa21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 BARX2Q9UMQ3 279 aaPredicted RBP21.71■■□□□ 1.07
TSPAN4-209ENST00000409543 DDHD2O94830 711 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 NAMPTP43490 491 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 SLC11A1P49279 550 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 ATP2C1P98194 919 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 ZP2Q05996 745 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 KCNC3Q14003 757 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 BMS1Q14692 1282 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 PPP2R5AQ15172 486 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms