RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SOWAHDA6NJG2 315 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 K7ERI5 159 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 F2P00734 622 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 SRGAP2CP0DJJ0 459 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 AKR1A1P14550 325 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 KLRC1P26715 233 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 APBA1Q02410 837 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 GRIK4Q16099 956 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 E4F1Q66K89 784 aaPredicted RBP15.35■□□□□ 0.05
GPNMB-203ENST00000409458 INTS8Q75QN2 995 aaKnown RBP15.35■□□□□ 0.05
GPNMB-203ENST00000409458 CBWD2Q8IUF1 395 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 RNF149Q8NC42 400 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 NEK11Q8NG66 645 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 POMGNT1Q8WZA1 660 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 KAT2BQ92831 832 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 IQCDQ96DY2 449 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 NAA15Q9BXJ9 866 aaKnown RBP15.35■□□□□ 0.05
GPNMB-203ENST00000409458 RNF186Q9NXI6 227 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 MAPK13O15264 365 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 TRPA1O75762 1119 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 NOL4O94818 638 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 KRT13P13646 458 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 GARTP22102 1010 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 VEGFBP49765 207 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 CPT1AP50416 773 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 DLG4P78352 724 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 HTRA3P83110 453 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 ZBED6P86452 979 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 BEX3Q00994 111 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 TRIM32Q13049 653 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 MTF1Q14872 753 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 SNRNP35Q16560 246 aaKnown RBP15.34■□□□□ 0.05
GPNMB-203ENST00000409458 MFSD14CQ5VZR4 134 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 MTHFD1LQ6UB35 978 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 PLEKHO2Q8TD55 490 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 ZNF668Q96K58 619 aaPredicted RBP15.34■□□□□ 0.05
GPNMB-203ENST00000409458 NLRP4Q96MN2 994 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 TARS2Q9BW92 718 aaKnown RBP15.34■□□□□ 0.05
GPNMB-203ENST00000409458 Q9Y3F1 56 aa15.34■□□□□ 0.05
GPNMB-203ENST00000409458 MAGEB2O15479 319 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 FMO5P49326 533 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 VAMP7P51809 220 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 KIF22Q14807 665 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 CBWD6Q4V339 395 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 CBWD3Q5JTY5 395 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 CBWD5Q5RIA9 395 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 MARCH8Q5T0T0 291 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 DPY19L2P1Q6NXN4 242 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 RAD9BQ6WBX8 426 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 TOGARAM2Q6ZUX3 1019 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 ZBTB8OSQ8IWT0 167 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 CCAR2Q8N163 923 aaKnown RBP15.33■□□□□ 0.04
GPNMB-203ENST00000409458 OR8K1Q8NGG5 319 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 BAP1Q92560 729 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 FBXL18Q96ME1 805 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 HAPLN2Q9GZV7 340 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 AP5M1Q9H0R1 490 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 GANQ9H2C0 597 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 KCND1Q9NSA2 647 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 GCNT4Q9P109 453 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 STYXL1Q9Y6J8 313 aa15.33■□□□□ 0.04
GPNMB-203ENST00000409458 GTPBP10A4D1E9 387 aaKnown RBP15.32■□□□□ 0.04
GPNMB-203ENST00000409458 TTLL13PA6NNM8 815 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 MYL3P08590 195 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 ACTN1P12814 892 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 SLC9A1P19634 815 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 PON1P27169 355 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 EFNA5P52803 228 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 TFDP1Q14186 410 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 EXOC3L4Q17RC7 722 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 KIAA0753Q2KHM9 967 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 C1orf220Q5T0J3 134 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 WDR59Q6PJI9 974 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 GBP6Q6ZN66 633 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 GPD1LQ8N335 351 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 CD99L2Q8TCZ2 262 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 PPP1R13LQ8WUF5 828 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 C2orf40Q9H1Z8 148 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 TRMT1Q9NXH9 659 aaKnown RBP15.32■□□□□ 0.04
GPNMB-203ENST00000409458 CEP72Q9P209 647 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 KAT6AQ92794 2004 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 MYADML2A6NDP7 307 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 MSCO60682 206 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 PRKCBP05771 671 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 SMIM10L2AP0DMW4 78 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 SMIM10L2BP0DMW5 78 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 MAP2K2P36507 400 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 CHMP4BP1P59074 171 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 MYL7Q01449 175 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 MFSD10Q14728 455 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 MEA1Q16626 185 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 FSCN1Q16658 493 aaKnown RBP15.32■□□□□ 0.04
GPNMB-203ENST00000409458 CYP26C1Q6V0L0 522 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 ZNF397Q8NF99 534 aaPredicted RBP15.32■□□□□ 0.04
GPNMB-203ENST00000409458 LMBR1Q8WVP7 490 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 ZBTB45Q96K62 511 aaPredicted RBP15.32■□□□□ 0.04
GPNMB-203ENST00000409458 PPP1R16BQ96T49 567 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 FAM213AQ9BRX8 229 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 PLCB1Q9NQ66 1216 aa15.32■□□□□ 0.04
GPNMB-203ENST00000409458 SETD4Q9NVD3 440 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms