RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 POLR2DO15514 142 aaKnown RBP11.68□□□□□ -0.54
RPAIN-204ENST00000405578 ASAP2O43150 1006 aa11.68□□□□□ -0.54
RPAIN-204ENST00000405578 UPP2O95045 317 aa11.68□□□□□ -0.54
RPAIN-204ENST00000405578 CYP11B2P19099 503 aa11.68□□□□□ -0.54
RPAIN-204ENST00000405578 CTNNB1P35222 781 aa11.68□□□□□ -0.54
RPAIN-204ENST00000405578 GTF2F1P35269 517 aaKnown RBP eCLIP11.68□□□□□ -0.54
RPAIN-204ENST00000405578 SYKP43405 635 aa11.68□□□□□ -0.54
RPAIN-204ENST00000405578 ZXDAP98168 799 aa11.68□□□□□ -0.54
RPAIN-204ENST00000405578 HIC1Q14526 733 aa11.68□□□□□ -0.54
RPAIN-204ENST00000405578 MXD4Q14582 209 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-204ENST00000405578 TPRNQ4KMQ1 711 aa11.68□□□□□ -0.54
RPAIN-204ENST00000405578 FAM102BQ5T8I3 360 aa11.68□□□□□ -0.54
RPAIN-204ENST00000405578 USP49Q70CQ1 688 aa11.68□□□□□ -0.54
RPAIN-204ENST00000405578 SYT2Q8N9I0 419 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-204ENST00000405578 SUCLA2Q9P2R7 463 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-204ENST00000405578 A0A087WWV3 80 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 IGKV6-21A0A0C4DH24 114 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 A0A1B0GVL5 298 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 RSPH10B2B2RC85 870 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 LINC01565O15544 149 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 RSPH10BP0C881 870 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 PFKFB1P16118 471 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 CLCN3P51790 818 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 MRPS6P82932 125 aaKnown RBP11.67□□□□□ -0.54
RPAIN-204ENST00000405578 TFDP1Q14186 410 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 DHX8Q14562 1220 aaKnown RBP11.67□□□□□ -0.54
RPAIN-204ENST00000405578 PPP2R5AQ15172 486 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 RUFY4Q6ZNE9 571 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 CLEC17AQ6ZS10 378 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 GPBP1Q86WP2 473 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 KIAA0319LQ8IZA0 1049 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 LRRC71Q8N4P6 559 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 TMEM87AQ8NBN3 555 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 KIFAP3Q92845 792 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 DHX58Q96C10 678 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 IFT74Q96LB3 600 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 DRC1Q96MC2 740 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 TNMDQ9H2S6 317 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 IGFLR1Q9H665 355 aa11.67□□□□□ -0.54
RPAIN-204ENST00000405578 PLXNA4Q9HCM2 1894 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 KAT6AQ92794 2004 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 H0Y858 1186 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 GRM6O15303 877 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 TBCAO75347 108 aaKnown RBP11.66□□□□□ -0.54
RPAIN-204ENST00000405578 PRPF40AO75400 957 aaKnown RBP11.66□□□□□ -0.54
RPAIN-204ENST00000405578 CTSHP09668 335 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 GUCY2CP25092 1073 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 SLC12A3P55017 1021 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 UBE2HP62256 183 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 MCM6Q14566 821 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 PLEKHG4Q58EX7 1191 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 ODR4Q5SWX8 454 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 RINT1Q6NUQ1 792 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 KANK3Q6NY19 840 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 MAEAQ7L5Y9 396 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 ASCL5Q7RTU5 278 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 KCNK18Q7Z418 384 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 ZNF410Q86VK4 478 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 RHPN2Q8IUC4 686 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 NLRP7Q8WX94 980 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 TOP1MTQ969P6 601 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 TMEM143Q96AN5 459 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 ZBTB10Q96DT7 871 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 CEP89Q96ST8 783 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 IFIH1Q9BYX4 1025 aaKnown RBP11.66□□□□□ -0.54
RPAIN-204ENST00000405578 INO80BQ9C086 356 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-204ENST00000405578 LMAN2LQ9H0V9 348 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 IRF2BPLQ9H1B7 796 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 C17orf75Q9HAS0 396 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 TLR9Q9NR96 1032 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 HOOK1Q9UJC3 728 aaKnown RBP11.66□□□□□ -0.54
RPAIN-204ENST00000405578 GINS2Q9Y248 185 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 COL4A3BPQ9Y5P4 624 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 TRPV2Q9Y5S1 764 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 DCHS1Q96JQ0 3298 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 CACNA1BQ00975 2339 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 DOCK5Q9H7D0 1870 aa11.66□□□□□ -0.54
RPAIN-204ENST00000405578 FAM237AA0A1B0GTK4 181 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-204ENST00000405578 LOC730098B7Z3J9 87 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 VTNP04004 478 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 SLFN14P0C7P3 912 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 AVPR2P30518 371 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 PHKA2P46019 1235 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 NDUFV1P49821 464 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 NDUFA8P51970 172 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 CRYBB1P53674 252 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-204ENST00000405578 SMTNP53814 917 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 NLRP11P59045 1033 aaKnown RBP11.65□□□□□ -0.54
RPAIN-204ENST00000405578 FAM160A1Q05DH4 1040 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 SIGLEC14Q08ET2 396 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 TMEM62Q0P6H9 643 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 LAMTOR4Q0VGL1 99 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 KIZQ2M2Z5 673 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 FAM43BQ6ZT52 329 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-204ENST00000405578 C1orf186Q6ZWK4 172 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 ERMP1Q7Z2K6 904 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 LINC01465Q8N7H1 131 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 CNNM3Q8NE01 707 aa11.65□□□□□ -0.54
RPAIN-204ENST00000405578 PRPF31Q8WWY3 499 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms