RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GBP2P32456 591 aaPredicted RBP13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 ADD1P35611 737 aaKnown RBP13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 TBC1D8BQ0IIM8 1120 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 BMS1Q14692 1282 aaKnown RBP13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 PFKFB3Q16875 520 aaPredicted RBP13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 KIAA0319Q5VV43 1072 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 PHLDB3Q6NSJ2 640 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 GLB1LQ6UWU2 654 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 B3GNT9Q6UX72 402 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 MRPL10Q7Z7H8 261 aaKnown RBP13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 C1orf210Q8IVY1 113 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 TMEM87AQ8NBN3 555 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 RUBCNQ92622 972 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 SCLT1Q96NL6 688 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 GCOM2Q9BZD3 368 aaPredicted RBP13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 MINDY3Q9H8M7 445 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 NRBP2Q9NSY0 501 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 RBM28Q9NW13 759 aaKnown RBP13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 SAMM50Q9Y512 469 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 ASPMQ8IZT6 3477 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 MIA3Q5JRA6 1907 aa13.41□□□□□ -0.26
SPTLC1P3-201ENST00000403408 NOTCH4Q99466 2003 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 ATRXP46100 2492 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 ANHXE9PGG2 379 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 ZBTB43O43298 467 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 CHMP2AO43633 222 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 POMCP01189 267 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 HOXA11P31270 313 aaPredicted RBP13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 SETQ01105 290 aaPredicted RBP13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 RNASELQ05823 741 aaKnown RBP13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 HTR4Q13639 388 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 ADCK5Q3MIX3 580 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 MTERF2Q49AM1 385 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 RASEFQ8IZ41 740 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 SLC5A5Q92911 643 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 B3GALT6Q96L58 329 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 RPS6KC1Q96S38 1066 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 HERC2P3Q9BVR0 1158 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 EMILIN2Q9BXX0 1053 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 NIFKQ9BYG3 293 aaKnown RBP13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 RHOBTB2Q9BYZ6 727 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 ZMYND12Q9H0C1 365 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 IFT122Q9HBG6 1241 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 RXFP1Q9HBX9 757 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 ARHGEF3Q9NR81 526 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 MIOSQ9NXC5 875 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 MTF2Q9Y483 593 aaPredicted RBP13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 PCDHB2Q9Y5E7 798 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 PATJQ8NI35 1801 aa13.4□□□□□ -0.26
SPTLC1P3-201ENST00000403408 ESYT2A0FGR8 921 aa13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 hCG_1984214I3L0E3 225 aa13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 SOD2P04179 222 aa13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 LAMP2P13473 410 aa13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 AK2P54819 239 aa13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 ZNF713Q8N859 430 aaPredicted RBP13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 SMG7Q92540 1137 aaKnown RBP13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 ESYT1Q9BSJ8 1104 aa13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 MRPL17Q9NRX2 175 aaKnown RBP13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 SUCLA2Q9P2R7 463 aaPredicted RBP13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 FAN1Q9Y2M0 1017 aa13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 PRG3Q9Y2Y8 225 aaPredicted RBP13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 SIT1Q9Y3P8 196 aa13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 NUMBLQ9Y6R0 609 aa13.39□□□□□ -0.27
SPTLC1P3-201ENST00000403408 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 GOLGA8AA7E2F4 631 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 GOLGA8BA8MQT2 603 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 PSMD10O75832 226 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 TGM1P22735 817 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 ATXN1P54253 815 aaKnown RBP13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 GPC5P78333 572 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 LILRA6Q6PI73 481 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 CATSPER4Q7RTX7 472 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 RHPN2Q8IUC4 686 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 COLGALT2Q8IYK4 626 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 REXO1Q8N1G1 1221 aaKnown RBP13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 SMG8Q8ND04 991 aaKnown RBP13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 PJA1Q8NG27 643 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 FGF14Q92915 247 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 TMEM175Q9BSA9 504 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 NT5C3AQ9H0P0 336 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 GLT8D2Q9H1C3 349 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 SLC2A4RGQ9NR83 387 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 AGPAT5Q9NUQ2 364 aa13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 SEPT9Q9UHD8 586 aaPredicted RBP13.38□□□□□ -0.27
SPTLC1P3-201ENST00000403408 SDK1Q7Z5N4 2213 aa13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 KLF18A0A0U1RQI7 1052 aa13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 TGM5O43548 720 aa13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 MAFO75444 373 aaPredicted RBP13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 ALDH2P05091 517 aa13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 CPA1P15085 419 aa13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 RPL17P18621 184 aaKnown RBP13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 SFPQP23246 707 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 STARD6P59095 220 aa13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 NTHL1P78549 312 aa13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 PLA2G4FQ68DD2 849 aa13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 DCLRE1AQ6PJP8 1040 aa13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 PARM1Q6UWI2 310 aa13.37□□□□□ -0.27
SPTLC1P3-201ENST00000403408 ANO5Q75V66 913 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms