RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CTGFP29279 349 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 STRN3Q13033 797 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 IRF5Q13568 498 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 POMGNT1Q8WZA1 660 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 NHEJ1Q9H9Q4 299 aaPredicted RBP27.94■■■□□ 2.06
CPNE1-205ENST00000401607 USP20Q9Y2K6 914 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 PHLPP2Q6ZVD8 1323 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 A0A0U1RQJ8 604 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 K7ERI5 159 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 EDN1P05305 212 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 CYP2B6P20813 491 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 TNFAIP2Q03169 654 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 GRM1Q13255 1194 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 SNRNP35Q16560 246 aaKnown RBP27.94■■■□□ 2.06
CPNE1-205ENST00000401607 ATRIPQ8WXE1 791 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 PSPC1Q8WXF1 523 aaKnown RBP27.94■■■□□ 2.06
CPNE1-205ENST00000401607 JPH2Q9BR39 696 aaPredicted RBP27.94■■■□□ 2.06
CPNE1-205ENST00000401607 ARHGAP20Q9P2F6 1191 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 REXO2Q9Y3B8 237 aaKnown RBP27.94■■■□□ 2.06
CPNE1-205ENST00000401607 KIF2AO00139 706 aaPredicted RBP27.93■■■□□ 2.06
CPNE1-205ENST00000401607 CA12O43570 354 aa27.93■■■□□ 2.06
CPNE1-205ENST00000401607 ZNF865P0CJ78 1059 aaPredicted RBP27.93■■■□□ 2.06
CPNE1-205ENST00000401607 INSRRP14616 1297 aa27.93■■■□□ 2.06
CPNE1-205ENST00000401607 UCHL3P15374 230 aa27.93■■■□□ 2.06
CPNE1-205ENST00000401607 RGS2P41220 211 aa27.93■■■□□ 2.06
CPNE1-205ENST00000401607 LIG4P49917 911 aa27.93■■■□□ 2.06
CPNE1-205ENST00000401607 LAMTOR4Q0VGL1 99 aa27.93■■■□□ 2.06
CPNE1-205ENST00000401607 ZNF484Q5JVG2 852 aa27.93■■■□□ 2.06
CPNE1-205ENST00000401607 CYP4F22Q6NT55 531 aa27.93■■■□□ 2.06
CPNE1-205ENST00000401607 TRIM65Q6PJ69 517 aa27.93■■■□□ 2.06
CPNE1-205ENST00000401607 SOCS4Q8WXH5 440 aa27.93■■■□□ 2.06
CPNE1-205ENST00000401607 ZBTB10Q96DT7 871 aa27.93■■■□□ 2.06
CPNE1-205ENST00000401607 NUCKS1Q9H1E3 243 aaKnown RBP27.93■■■□□ 2.06
CPNE1-205ENST00000401607 STYXL1Q9Y6J8 313 aa27.93■■■□□ 2.06
CPNE1-205ENST00000401607 TNPO2O14787 897 aaKnown RBP27.92■■■□□ 2.06
CPNE1-205ENST00000401607 C22orf31O95567 290 aa27.92■■■□□ 2.06
CPNE1-205ENST00000401607 IGHA2P01877 340 aa27.92■■■□□ 2.06
CPNE1-205ENST00000401607 PLEKP08567 350 aaPredicted RBP27.92■■■□□ 2.06
CPNE1-205ENST00000401607 MYL7Q01449 175 aa27.92■■■□□ 2.06
CPNE1-205ENST00000401607 PPP3CAQ08209 521 aa27.92■■■□□ 2.06
CPNE1-205ENST00000401607 OLFML2BQ68BL8 750 aa27.92■■■□□ 2.06
CPNE1-205ENST00000401607 SYN2Q92777 582 aaPredicted RBP27.92■■■□□ 2.06
CPNE1-205ENST00000401607 APBA2Q99767 749 aa27.92■■■□□ 2.06
CPNE1-205ENST00000401607 FHOD1Q9Y613 1164 aa27.92■■■□□ 2.06
CPNE1-205ENST00000401607 CYP2C19P33261 490 aa27.91■■■□□ 2.06
CPNE1-205ENST00000401607 MXD4Q14582 209 aaPredicted RBP27.91■■■□□ 2.06
CPNE1-205ENST00000401607 CDCA2Q69YH5 1023 aaPredicted RBP27.91■■■□□ 2.06
CPNE1-205ENST00000401607 PAXIP1Q6ZW49 1069 aaPredicted RBP27.91■■■□□ 2.06
CPNE1-205ENST00000401607 CCDC170Q8IYT3 715 aa27.91■■■□□ 2.06
CPNE1-205ENST00000401607 SUCLA2Q9P2R7 463 aaPredicted RBP27.91■■■□□ 2.06
CPNE1-205ENST00000401607 FBXL5Q9UKA1 691 aa27.91■■■□□ 2.06
CPNE1-205ENST00000401607 GNEQ9Y223 722 aaKnown RBP27.91■■■□□ 2.06
CPNE1-205ENST00000401607 EFCAB12Q6NXP0 572 aa27.91■■■□□ 2.06
CPNE1-205ENST00000401607 GPIHBP1Q8IV16 184 aa27.91■■■□□ 2.06
CPNE1-205ENST00000401607 GPD1LQ8N335 351 aa27.91■■■□□ 2.06
CPNE1-205ENST00000401607 CCDC113Q9H0I3 377 aa27.91■■■□□ 2.06
CPNE1-205ENST00000401607 AJAP1Q9UKB5 411 aaPredicted RBP27.91■■■□□ 2.06
CPNE1-205ENST00000401607 CYLC1P35663 651 aaPredicted RBP27.9■■■□□ 2.06
CPNE1-205ENST00000401607 IGBP1P78318 339 aa27.9■■■□□ 2.06
CPNE1-205ENST00000401607 SFMBT2Q5VUG0 894 aa27.9■■■□□ 2.06
CPNE1-205ENST00000401607 HGSNATQ68CP4 663 aa27.9■■■□□ 2.06
CPNE1-205ENST00000401607 MFSD14AQ96MC6 490 aa27.9■■■□□ 2.06
CPNE1-205ENST00000401607 TARS2Q9BW92 718 aaKnown RBP27.9■■■□□ 2.06
CPNE1-205ENST00000401607 HAPLN2Q9GZV7 340 aa27.9■■■□□ 2.06
CPNE1-205ENST00000401607 ZNF215Q9UL58 517 aaPredicted RBP27.9■■■□□ 2.06
CPNE1-205ENST00000401607 H3BRB1 525 aa27.89■■■□□ 2.06
CPNE1-205ENST00000401607 CLCN3P51790 818 aa27.89■■■□□ 2.06
CPNE1-205ENST00000401607 ETF1P62495 437 aaKnown RBP27.89■■■□□ 2.06
CPNE1-205ENST00000401607 RNF149Q8NC42 400 aa27.89■■■□□ 2.06
CPNE1-205ENST00000401607 TUT1Q9H6E5 874 aaKnown RBP27.89■■■□□ 2.06
CPNE1-205ENST00000401607 MGAMO43451 1857 aa27.89■■■□□ 2.06
CPNE1-205ENST00000401607 COL1A2P08123 1366 aa27.89■■■□□ 2.06
CPNE1-205ENST00000401607 EIF3CLB5ME19 914 aaKnown RBP27.88■■■□□ 2.05
CPNE1-205ENST00000401607 TUBB4AP04350 444 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 GJB1P08034 283 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 DGKDQ16760 1214 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 RHPN2Q8IUC4 686 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 LINC01465Q8N7H1 131 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 LMO3Q8TAP4 145 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 PARD3BQ8TEW8 1205 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 ZNF592Q92610 1267 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 EIF3CQ99613 913 aaKnown RBP27.88■■■□□ 2.05
CPNE1-205ENST00000401607 INTS2Q9H0H0 1204 aaKnown RBP27.88■■■□□ 2.05
CPNE1-205ENST00000401607 ZSWIM8A7E2V4 1837 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 P4HA2O15460 535 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 N4BP1O75113 896 aaKnown RBP27.88■■■□□ 2.05
CPNE1-205ENST00000401607 TOMM70O94826 608 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 SRGAP2CP0DJJ0 459 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 GCLMP48507 274 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 EFNA5P52803 228 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 CYP24A1Q07973 514 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 RAPGEF1Q13905 1077 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 GJB7Q6PEY0 223 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 SYT10Q6XYQ8 523 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 METTL13Q8N6R0 699 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 ZBTB45Q96K62 511 aaPredicted RBP27.88■■■□□ 2.05
CPNE1-205ENST00000401607 AIPL1Q9NZN9 384 aa27.88■■■□□ 2.05
CPNE1-205ENST00000401607 DYNC1LI2O43237 492 aaPredicted RBP27.87■■■□□ 2.05
CPNE1-205ENST00000401607 EXTL3O43909 919 aa27.87■■■□□ 2.05
CPNE1-205ENST00000401607 MSCO60682 206 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms