RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 CCDC60Q8IWA6 550 aaPredicted RBP17.07■□□□□ 0.32
CDC42-203ENST00000400259 ZSWIM2Q8NEG5 633 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 ZNFX1Q9P2E3 1918 aaKnown RBP17.06■□□□□ 0.32
CDC42-203ENST00000400259 DENND3A2RUS2 1198 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 TMEM253P0C7T8 217 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 SUPT20HL2P0C7V6 817 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 ZBTB48P10074 688 aaPredicted RBP17.06■□□□□ 0.32
CDC42-203ENST00000400259 CNGA1P29973 690 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 MXI1P50539 228 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 GALCP54803 685 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 PRKCEQ02156 737 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 RPS6KA1Q15418 735 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 SNRNP35Q16560 246 aaKnown RBP17.06■□□□□ 0.32
CDC42-203ENST00000400259 LBX2Q6XYB7 198 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 GLYCTKQ8IVS8 523 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 MS4A14Q96JA4 679 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 TMEM117Q9H0C3 514 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 ACBD3Q9H3P7 528 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 XPNPEP1Q9NQW7 623 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 CYP26B1Q9NR63 512 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 RBM12Q9NTZ6 932 aaKnown RBP17.06■□□□□ 0.32
CDC42-203ENST00000400259 SMARCAL1Q9NZC9 954 aa17.06■□□□□ 0.32
CDC42-203ENST00000400259 LRRIQ3A6PVS8 624 aaPredicted RBP17.05■□□□□ 0.32
CDC42-203ENST00000400259 FOXN3O00409 490 aaPredicted RBP17.05■□□□□ 0.32
CDC42-203ENST00000400259 ATG7O95352 703 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 NOP2P46087 812 aaKnown RBP17.05■□□□□ 0.32
CDC42-203ENST00000400259 GCLMP48507 274 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 SYCE1Q8N0S2 351 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 TMC2Q8TDI7 906 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 AENQ8WTP8 325 aaKnown RBP17.05■□□□□ 0.32
CDC42-203ENST00000400259 PBKQ96KB5 322 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 ATP6V0A4Q9HBG4 840 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 PDE11AQ9HCR9 933 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 STXBP5LQ9Y2K9 1186 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 COQ4Q9Y3A0 265 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 H0YCG3 227 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 STXBP2Q15833 593 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 ARHGAP44Q17R89 818 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 XKR3Q5GH77 459 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 SLC39A4Q6P5W5 647 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 ARHGEF19Q8IW93 802 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 RFFLQ8WZ73 363 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 TAF4BQ92750 862 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 MFSD14AQ96MC6 490 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 UBE2TQ9NPD8 197 aaPredicted RBP17.05■□□□□ 0.32
CDC42-203ENST00000400259 STIM2Q9P246 746 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 FBXO40Q9UH90 709 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 DMGDHQ9UI17 866 aaKnown RBP17.05■□□□□ 0.32
CDC42-203ENST00000400259 KCNG1Q9UIX4 513 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 TELO2Q9Y4R8 837 aa17.05■□□□□ 0.32
CDC42-203ENST00000400259 MYBL2P10244 700 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 SCP2P22307 547 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 TRMT1LQ7Z2T5 733 aaKnown RBP17.04■□□□□ 0.32
CDC42-203ENST00000400259 CBWD2Q8IUF1 395 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 PARD3BQ8TEW8 1205 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 KIFC3Q9BVG8 833 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 ARHGAP28Q9P2N2 729 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 SUCLA2Q9P2R7 463 aaPredicted RBP17.04■□□□□ 0.32
CDC42-203ENST00000400259 SEPT9Q9UHD8 586 aaPredicted RBP17.04■□□□□ 0.32
CDC42-203ENST00000400259 TMEM59LQ9UK28 342 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 PACSIN2Q9UNF0 486 aaPredicted RBP17.04■□□□□ 0.32
CDC42-203ENST00000400259 ADGRA3Q8IWK6 1321 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 ZMYND10O75800 440 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 TNFAIP3P21580 790 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 GARTP22102 1010 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 GTF2H1P32780 548 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 AARSP49588 968 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDC42-203ENST00000400259 BRDTQ58F21 947 aaPredicted RBP17.04■□□□□ 0.32
CDC42-203ENST00000400259 TREML2Q5T2D2 321 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 C8orf74Q6P047 294 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 DNAAF5Q86Y56 855 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 RIOX2Q8IUF8 465 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 HDAC7Q8WUI4 952 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 AGPAT1Q99943 283 aa17.04■□□□□ 0.32
CDC42-203ENST00000400259 MAFBQ9Y5Q3 323 aaPredicted RBP17.04■□□□□ 0.32
CDC42-203ENST00000400259 SP2Q02086 613 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 USP38Q8NB14 1042 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 ACTRT1Q8TDG2 376 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 HINFPQ9BQA5 517 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 TMEM8AQ9HCN3 771 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 ADARB2Q9NS39 739 aaKnown RBP17.03■□□□□ 0.32
CDC42-203ENST00000400259 SYNGAP1Q96PV0 1343 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 GOLGA8IPA6NC78 632 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 ERICH4A6NGS2 130 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 GOLGA8JA6NMD2 632 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 ALDH5A1P51649 535 aaPredicted RBP17.03■□□□□ 0.32
CDC42-203ENST00000400259 PRKG1Q13976 671 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 TCEAL1Q15170 157 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 KRT39Q6A163 491 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 USP37Q86T82 979 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 NT5DC3Q86UY8 548 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 CTNNBL1Q8WYA6 563 aaPredicted RBP17.03■□□□□ 0.32
CDC42-203ENST00000400259 CALR3Q96L12 384 aaKnown RBP17.03■□□□□ 0.32
CDC42-203ENST00000400259 IFT74Q96LB3 600 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 SELENOOQ9BVL4 669 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 MED4Q9NPJ6 270 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 TMEM51Q9NW97 253 aa17.03■□□□□ 0.32
CDC42-203ENST00000400259 IGKV6D-21A0A0A0MT36 114 aa17.02■□□□□ 0.32
CDC42-203ENST00000400259 ANKRD62A6NC57 917 aa17.02■□□□□ 0.32
CDC42-203ENST00000400259 LRRN2O75325 713 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms