RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 GPR75-ASB3A0A0A6YYF3 556 aa15.06■□□□□ 0
APOB-202ENST00000399256 TBCAO75347 108 aaKnown RBP15.06■□□□□ 0
APOB-202ENST00000399256 SUN1O94901 812 aa15.06■□□□□ 0
APOB-202ENST00000399256 ACSL3O95573 720 aa15.06■□□□□ 0
APOB-202ENST00000399256 TRIM49P0CI25 452 aa15.06■□□□□ 0
APOB-202ENST00000399256 TRIM49CP0CI26 452 aa15.06■□□□□ 0
APOB-202ENST00000399256 SPATA31C1P0DKV0 1188 aa15.06■□□□□ 0
APOB-202ENST00000399256 ADRA2BP18089 450 aa15.06■□□□□ 0
APOB-202ENST00000399256 COG2Q14746 738 aa15.06■□□□□ 0
APOB-202ENST00000399256 BTNL9Q6UXG8 535 aa15.06■□□□□ 0
APOB-202ENST00000399256 CCDC105Q8IYK2 499 aa15.06■□□□□ 0
APOB-202ENST00000399256 SYT11Q9BT88 431 aa15.06■□□□□ 0
APOB-202ENST00000399256 MXD3Q9BW11 206 aa15.06■□□□□ 0
APOB-202ENST00000399256 ANO3Q9BYT9 981 aa15.06■□□□□ 0
APOB-202ENST00000399256 BHMT2Q9H2M3 363 aa15.06■□□□□ 0
APOB-202ENST00000399256 KCNK9Q9NPC2 374 aa15.06■□□□□ 0
APOB-202ENST00000399256 BATF3Q9NR55 127 aa15.06■□□□□ 0
APOB-202ENST00000399256 HOMER3Q9NSC5 361 aa15.06■□□□□ 0
APOB-202ENST00000399256 RGPD3A6NKT7 1758 aaPredicted RBP15.06■□□□□ 0
APOB-202ENST00000399256 RGPD4Q7Z3J3 1758 aa15.06■□□□□ 0
APOB-202ENST00000399256 MYO3BQ8WXR4 1341 aa15.06■□□□□ 0
APOB-202ENST00000399256 SYNGAP1Q96PV0 1343 aa15.06■□□□□ 0
APOB-202ENST00000399256 GTPBP10A4D1E9 387 aaKnown RBP15.06■□□□□ 0
APOB-202ENST00000399256 EIF4E1BA6NMX2 242 aaKnown RBP15.06■□□□□ 0
APOB-202ENST00000399256 ZBTB5O15062 677 aa15.06■□□□□ 0
APOB-202ENST00000399256 TGFB1I1O43294 461 aa15.06■□□□□ 0
APOB-202ENST00000399256 POLD1P28340 1107 aa15.06■□□□□ 0
APOB-202ENST00000399256 TM4SF1P30408 202 aa15.06■□□□□ 0
APOB-202ENST00000399256 RHBDL3P58872 404 aa15.06■□□□□ 0
APOB-202ENST00000399256 CBWD6Q4V339 395 aa15.06■□□□□ 0
APOB-202ENST00000399256 CBWD3Q5JTY5 395 aa15.06■□□□□ 0
APOB-202ENST00000399256 CBWD5Q5RIA9 395 aa15.06■□□□□ 0
APOB-202ENST00000399256 ZNF804AQ7Z570 1209 aa15.06■□□□□ 0
APOB-202ENST00000399256 SLC20A1Q8WUM9 679 aa15.06■□□□□ 0
APOB-202ENST00000399256 ARHGEF2Q92974 986 aaKnown RBP15.06■□□□□ 0
APOB-202ENST00000399256 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.06■□□□□ 0
APOB-202ENST00000399256 CTNNAL1Q9UBT7 734 aa15.06■□□□□ 0
APOB-202ENST00000399256 PCDHA3Q9Y5H8 950 aa15.06■□□□□ 0
APOB-202ENST00000399256 PFASO15067 1338 aa15.05■□□□□ 0
APOB-202ENST00000399256 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.05■□□□□ -0
APOB-202ENST00000399256 RARGP13631 454 aa15.05■□□□□ -0
APOB-202ENST00000399256 CCND1P24385 295 aa15.05■□□□□ -0
APOB-202ENST00000399256 NMT1P30419 496 aaKnown RBP15.05■□□□□ -0
APOB-202ENST00000399256 PEX19P40855 299 aa15.05■□□□□ -0
APOB-202ENST00000399256 FMO5P49326 533 aa15.05■□□□□ -0
APOB-202ENST00000399256 ZNF131P52739 623 aa15.05■□□□□ -0
APOB-202ENST00000399256 BNIP1Q12981 228 aa15.05■□□□□ -0
APOB-202ENST00000399256 ZC2HC1CQ53FD0 456 aaPredicted RBP15.05■□□□□ -0
APOB-202ENST00000399256 TNFAIP8L3Q5GJ75 292 aa15.05■□□□□ -0
APOB-202ENST00000399256 CROCCP2Q86T23 111 aa15.05■□□□□ -0
APOB-202ENST00000399256 UBL4BQ8N7F7 174 aa15.05■□□□□ -0
APOB-202ENST00000399256 KCNV2Q8TDN2 545 aa15.05■□□□□ -0
APOB-202ENST00000399256 MICAL1Q8TDZ2 1067 aa15.05■□□□□ -0
APOB-202ENST00000399256 CDK5RAP2Q96SN8 1893 aa15.05■□□□□ -0
APOB-202ENST00000399256 POP1Q99575 1024 aaKnown RBP15.05■□□□□ -0
APOB-202ENST00000399256 TMEM109Q9BVC6 243 aa15.05■□□□□ -0
APOB-202ENST00000399256 NYXQ9GZU5 481 aa15.05■□□□□ -0
APOB-202ENST00000399256 PARP2Q9UGN5 583 aa15.05■□□□□ -0
APOB-202ENST00000399256 ANKRD62A6NC57 917 aa15.05■□□□□ -0
APOB-202ENST00000399256 PODXLO00592 558 aa15.05■□□□□ -0
APOB-202ENST00000399256 SPIRE1Q08AE8 756 aa15.05■□□□□ -0
APOB-202ENST00000399256 SLMAPQ14BN4 828 aa15.05■□□□□ -0
APOB-202ENST00000399256 CPNE8Q86YQ8 564 aa15.05■□□□□ -0
APOB-202ENST00000399256 FITM2Q8N6M3 262 aa15.05■□□□□ -0
APOB-202ENST00000399256 BORCS6Q96GS4 357 aa15.05■□□□□ -0
APOB-202ENST00000399256 PCYOX1Q9UHG3 505 aa15.05■□□□□ -0
APOB-202ENST00000399256 GH1P01241 217 aa15.04■□□□□ -0
APOB-202ENST00000399256 CTNNA2P26232 953 aa15.04■□□□□ -0
APOB-202ENST00000399256 PSMC2P35998 433 aaKnown RBP15.04■□□□□ -0
APOB-202ENST00000399256 MSH2P43246 934 aa15.04■□□□□ -0
APOB-202ENST00000399256 MESDQ14696 234 aa15.04■□□□□ -0
APOB-202ENST00000399256 ZNF746Q6NUN9 644 aaPredicted RBP15.04■□□□□ -0
APOB-202ENST00000399256 SPATA21Q7Z572 469 aa15.04■□□□□ -0
APOB-202ENST00000399256 TBC1D16Q8TBP0 767 aa15.04■□□□□ -0
APOB-202ENST00000399256 RMDN2Q96LZ7 410 aa15.04■□□□□ -0
APOB-202ENST00000399256 ZSWIM1Q9BR11 485 aa15.04■□□□□ -0
APOB-202ENST00000399256 INTS2Q9H0H0 1204 aaKnown RBP15.04■□□□□ -0
APOB-202ENST00000399256 DNAJC17Q9NVM6 304 aaKnown RBP15.04■□□□□ -0
APOB-202ENST00000399256 SLC5A4Q9NY91 659 aa15.04■□□□□ -0
APOB-202ENST00000399256 CYP2J2P51589 502 aa15.04■□□□□ -0
APOB-202ENST00000399256 ADCY1Q08828 1119 aa15.04■□□□□ -0
APOB-202ENST00000399256 BMT2Q1RMZ1 405 aa15.04■□□□□ -0
APOB-202ENST00000399256 SEL1L2Q5TEA6 688 aa15.04■□□□□ -0
APOB-202ENST00000399256 VSTM1Q6UX27 236 aa15.04■□□□□ -0
APOB-202ENST00000399256 SLFN12Q8IYM2 578 aa15.04■□□□□ -0
APOB-202ENST00000399256 ERMNQ8TAM6 284 aa15.04■□□□□ -0
APOB-202ENST00000399256 NAP1L4Q99733 375 aaKnown RBP15.04■□□□□ -0
APOB-202ENST00000399256 CDC42EP4Q9H3Q1 356 aaKnown RBP15.04■□□□□ -0
APOB-202ENST00000399256 ZMYM2Q9UBW7 1377 aa15.04■□□□□ -0
APOB-202ENST00000399256 TTLL1O95922 423 aa15.03■□□□□ -0
APOB-202ENST00000399256 PYGMP11217 842 aa15.03■□□□□ -0
APOB-202ENST00000399256 CTTNQ14247 550 aaKnown RBP15.03■□□□□ -0
APOB-202ENST00000399256 MAEAQ7L5Y9 396 aa15.03■□□□□ -0
APOB-202ENST00000399256 ART4Q93070 314 aa15.03■□□□□ -0
APOB-202ENST00000399256 FAM167BQ9BTA0 163 aa15.03■□□□□ -0
APOB-202ENST00000399256 ARHGEF10LQ9HCE6 1279 aa15.03■□□□□ -0
APOB-202ENST00000399256 ADAM22Q9P0K1 906 aa15.03■□□□□ -0
APOB-202ENST00000399256 FOXN3O00409 490 aaPredicted RBP15.03■□□□□ -0
APOB-202ENST00000399256 ATMINO43313 823 aaPredicted RBP15.03■□□□□ -0
APOB-202ENST00000399256 COMTP21964 271 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms