RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ZNF746Q6NUN9 644 aaPredicted RBP25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 MGARPQ8TDB4 240 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 YIPF3Q9GZM5 350 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 ADAM22Q9P0K1 906 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 THRAP3Q9Y2W1 955 aaKnown RBP25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 TCP11X1B4DZS4 312 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 FGFR4P22455 802 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 NOVP48745 357 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 MAP2K1Q02750 393 aaPredicted RBP25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 CBWD6Q4V339 395 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 CBWD3Q5JTY5 395 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 CBWD5Q5RIA9 395 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 SAMD1Q6SPF0 538 aaPredicted RBP25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 GBP7Q8N8V2 638 aaPredicted RBP25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 USP40Q9NVE5 1235 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 TRIM33Q9UPN9 1127 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 PTPN22Q9Y2R2 807 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 PPP2R5EQ16537 467 aa25.83■■□□□ 1.73
CSNK1E-203ENST00000396832 ZC3H3Q8IXZ2 948 aaKnown RBP25.83■■□□□ 1.73
CSNK1E-203ENST00000396832 SPDYE1Q8NFV5 336 aaPredicted RBP25.83■■□□□ 1.73
CSNK1E-203ENST00000396832 PARD3BQ8TEW8 1205 aa25.83■■□□□ 1.73
CSNK1E-203ENST00000396832 CTNNBL1Q8WYA6 563 aaPredicted RBP25.83■■□□□ 1.73
CSNK1E-203ENST00000396832 ZBTB10Q96DT7 871 aa25.83■■□□□ 1.73
CSNK1E-203ENST00000396832 IFT74Q96LB3 600 aa25.83■■□□□ 1.73
CSNK1E-203ENST00000396832 DNAJC12Q9UKB3 198 aa25.83■■□□□ 1.73
CSNK1E-203ENST00000396832 INTUQ9ULD6 942 aa25.83■■□□□ 1.73
CSNK1E-203ENST00000396832 PCDHAC2Q9Y5I4 1007 aa25.83■■□□□ 1.73
CSNK1E-203ENST00000396832 SMCHD1A6NHR9 2005 aa25.83■■□□□ 1.73
CSNK1E-203ENST00000396832 AHDC1Q5TGY3 1603 aaPredicted RBP25.83■■□□□ 1.73
CSNK1E-203ENST00000396832 EML1O00423 815 aa25.83■■□□□ 1.72
CSNK1E-203ENST00000396832 RASGRF2O14827 1237 aa25.83■■□□□ 1.72
CSNK1E-203ENST00000396832 LIN7AO14910 233 aaPredicted RBP25.83■■□□□ 1.72
CSNK1E-203ENST00000396832 HGSO14964 777 aaPredicted RBP25.83■■□□□ 1.72
CSNK1E-203ENST00000396832 ABL2P42684 1182 aa25.83■■□□□ 1.72
CSNK1E-203ENST00000396832 UBXN2AP68543 259 aa25.83■■□□□ 1.72
CSNK1E-203ENST00000396832 COG5Q9UP83 839 aa25.83■■□□□ 1.72
CSNK1E-203ENST00000396832 ATMINO43313 823 aaPredicted RBP25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 ATP11AP98196 1134 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 AUHQ13825 339 aaKnown RBP25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 TAOK1Q7L7X3 1001 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 CROCCP2Q86T23 111 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 FAM186BQ8IYM0 893 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 MYCT1Q8N699 235 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 NAP1L3Q99457 506 aaPredicted RBP25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 STMN4Q9H169 189 aaPredicted RBP25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 ARHGEF10LQ9HCE6 1279 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 TYW1Q9NV66 732 aaKnown RBP25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 IGKV6D-41A0A0C4DH26 115 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 MEIS2O14770 477 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 DRG2P55039 364 aaKnown RBP25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 LACTBP83111 547 aaPredicted RBP25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 MAPK7Q13164 816 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 DHX34Q14147 1143 aaKnown RBP25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 AP1ARQ63HQ0 302 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 PPP1R18Q6NYC8 613 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 TRMT1LQ7Z2T5 733 aaKnown RBP25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 CCDC25Q86WR0 208 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 CPNE8Q86YQ8 564 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 ETNPPLQ8TBG4 499 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 GRHL1Q9NZI5 618 aa25.82■■□□□ 1.72
CSNK1E-203ENST00000396832 EIF4E1BA6NMX2 242 aaKnown RBP25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 BRD2P25440 801 aaKnown RBP25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 TBC1D10BQ4KMP7 808 aaPredicted RBP25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 PRR5LQ6MZQ0 368 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 MAEAQ7L5Y9 396 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 KCNV2Q8TDN2 545 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 KRT35Q92764 455 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 DIS3Q9Y2L1 958 aaKnown RBP25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 ATAD5Q96QE3 1844 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 TGFB1I1O43294 461 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 ANXA13P27216 316 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 BARGINQ6ZT62 677 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 EPM2AIP1Q7L775 607 aaPredicted RBP25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 EXOC3L1Q86VI1 746 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 FITM2Q8N6M3 262 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 SYT2Q8N9I0 419 aaPredicted RBP25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 TBC1D16Q8TBP0 767 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 SLC20A1Q8WUM9 679 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 RASAL2Q9UJF2 1139 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 PITPNM2Q9BZ72 1349 aa25.81■■□□□ 1.72
CSNK1E-203ENST00000396832 FOXO6A8MYZ6 492 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 PDXKO00764 312 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 LINGO3P0C6S8 592 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 IL1R1P14778 569 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 TNFAIP8L3Q5GJ75 292 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 NUGGCQ68CJ6 796 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 BTNL9Q6UXG8 535 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 ASRGL1Q7L266 308 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 TPH2Q8IWU9 490 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 OLIG1Q8TAK6 271 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 TMEM109Q9BVC6 243 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 CARD9Q9H257 536 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 MLXIPLQ9NP71 852 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 GAKO14976 1311 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 SOX5P35711 763 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 TAF11Q15544 211 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 DOK7Q18PE1 504 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 OTUD6AQ7L8S5 288 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 CERS5Q8N5B7 392 aa25.8■■□□□ 1.72
CSNK1E-203ENST00000396832 RABGAP1Q9Y3P9 1069 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms